Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0126 ATGAGGAAGAGGGAAAGAGAGAACCCTTGTGGGGTTTGTGGCCACTATCACAAATACGAAGAAGGGGAAGTTTGTGGGATTTGTGGTCATCGTGTTCCCGCTACATCGGAGAAAACTTCGTTGCAAGTTAGCGCGTTTCCTTCAGAGATCTTGCCGGAGTTTCTTTATTTGGGAAGCTATGATAACGCTTCACGGTCTGAACTTTTGAAGACTCAAGGAATCTCCCGCGTTCTTAACACGGTGCCTGCTTGTCAAAATCTCTACAAGAACTCCTTCACTTATCACTGCCTCCAATACGATAAGACGTTACCTTTTGATGATGCGGTTGAATTTCTAGAGCAATGTGAGAGAGACAAGGCTCGTGTTCTGGTGCACTGCATGTCAGGAAAAAACAGGTCTCCAGCTATTGTAATCGCATTCTTGATGAAATGCAAACGTTGGAGACTTGCTCAGAGTTACCAGTGGGTGAAAGAGCGGAGGCAATCTGTTGACTTAACTGAGCCTGTCTATCAGCAGCTGCAAGAGTATGAGCAGAAGCTTTTTGGATCAGCAGAAAACACCCTGCCAATCTTCCCACCTGTTGGTCTGCCTTCTTTTAGCTTCGGCTTCCCAAAGACGGGCGACCCAGTTCCCATAACTCCATTCAACACCATTGGTGCGACATCAATTTTTTCCCGCCCTACCATAGACGTACCTTCCCACGAGTTCACGTTCGGTGCTGGCCAGACTCAGACCAGTTTCTCCGCAAGCCCCTTCGGAGCCAATCCACGAAACTCAACCAGCAGCAACATCCAAATGGACAGTGCTTAA 810 47.78 MRKRERENPCGVCGHYHKYEEGEVCGICGHRVPATSEKTSLQVSAFPSEILPEFLYLGSYDNASRSELLKTQGISRVLNTVPACQNLYKNSFTYHCLQYDKTLPFDDAVEFLEQCERDKARVLVHCMSGKNRSPAIVIAFLMKCKRWRLAQSYQWVKERRQSVDLTEPVYQQLQEYEQKLFGSAENTLPIFPPVGLPSFSFGFPKTGDPVPITPFNTIGATSIFSRPTIDVPSHEFTFGAGQTQTSFSASPFGANPRNSTSSNIQMDSA 269
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1183594 1186940 + Tan0001620.2 Tan02g0126 742752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0126 269 Gene3D Protein tyrosine phosphatase superfamily 40 187 IPR029021 -
Tan02g0126 269 ProSiteProfiles Dual specificity protein phosphatase domain profile. 46 182 IPR020422 GO:0006470(InterPro)
Tan02g0126 269 PANTHER PROTEIN-TYROSINE-PHOSPHATASE IBR5 1 268 IPR044212 GO:0005634(PANTHER)|GO:0009734(InterPro)|GO:0009738(InterPro)|GO:0033549(InterPro)|GO:0033549(PANTHER)|GO:0043407(InterPro)
Tan02g0126 269 SMART dsp_5 46 179 IPR020422 GO:0006470(InterPro)
Tan02g0126 269 ProSitePatterns Tyrosine specific protein phosphatases active site. 124 134 IPR016130 GO:0016311(InterPro)
Tan02g0126 269 FunFam Protein-tyrosine-phosphatase IBR5 36 186 - -
Tan02g0126 269 CDD DSP_plant_IBR5-like 47 176 - -
Tan02g0126 269 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 47 182 IPR029021 -
Tan02g0126 269 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 103 171 IPR000387 GO:0016311(InterPro)
Tan02g0126 269 MobiDBLite consensus disorder prediction 247 269 - -
Tan02g0126 269 Pfam Dual specificity phosphatase, catalytic domain 55 179 IPR000340 GO:0016311(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0125 Tan-Chr2:1183594 Tan02g0126 Tan-Chr2:1183594 2.10E-151 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0126 K04459 - csv:101211000 518.079