Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan02g0130 | ATGCGGCGAGGCAGAGCCACGGATCAATTGGCGGCGGCGCAACCAGTTCATGAACCAGTTAAAGAAGTCCGATTCAGAGGCGTTCGGAAGCGTCCATGGGGCCGATACGCTGCCGAGATTAGAGATCCCTGGAAGAAGACTCGCGTTTGGCTCGGCACCTTCGATACAGCGGAGGATGCTGCTAGAGCTTACGACGCCGCCGCTCTCTCTCTCCGGGGACCGAAGGCGAAGACGAACTTTCCGTTGCATCCGTCGGTGATCTCTGTTCATCAGCAAATTCCATTCTCGCAGGAGTTTCACGATTCCGGCGGATTCTGCAAGATTAGCAACATTCCGGTCAATAGACCTACGTCGAGCAGTCTAAGCTCCACCGTGGAGTCTTTCAGCGGGCCGCGGGTTTCGATTCCGGCTCCGTCGGTTCCGAAGCTCCGCCGTAACTCCCTGCCGCCAGTCTCGCCCGACGATTGCCATAGCGACTGCGATTCATCGTCTTCCGTTGTTGATGACAGTGAGGAATATGCTCAGACGTCGTCAATTCGCAGAGTGTTGCCGTTCGATCTGAATCTACCTCCTCCACTGCCGCCGCCGCACGACATCGATTTATCCGGTGACGATCTTCAGGTTACTACTCTATGTTTTTGA | 642 | 55.76 | MRRGRATDQLAAAQPVHEPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDAARAYDAAALSLRGPKAKTNFPLHPSVISVHQQIPFSQEFHDSGGFCKISNIPVNRPTSSSLSSTVESFSGPRVSIPAPSVPKLRRNSLPPVSPDDCHSDCDSSSSVVDDSEEYAQTSSIRRVLPFDLNLPPPLPPPHDIDLSGDDLQVTTLCF | 213 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 1217897 | 1219161 | - | Tan0007110.1 | Tan02g0130 | 742756 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan02g0130 | 213 | MobiDBLite | consensus disorder prediction | 116 | 130 | - | - | |
Tan02g0130 | 213 | MobiDBLite | consensus disorder prediction | 116 | 173 | - | - | |
Tan02g0130 | 213 | SUPERFAMILY | DNA-binding domain | 25 | 82 | IPR016177 | GO:0003677(InterPro) | |
Tan02g0130 | 213 | CDD | AP2 | 24 | 81 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan02g0130 | 213 | PANTHER | AP2 DOMAIN CLASS TRANSCRIPTION FACTOR | 15 | 178 | - | - | |
Tan02g0130 | 213 | PRINTS | Ethylene responsive element binding protein signature | 25 | 36 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan02g0130 | 213 | PRINTS | Ethylene responsive element binding protein signature | 47 | 63 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan02g0130 | 213 | ProSiteProfiles | AP2/ERF domain profile. | 24 | 81 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan02g0130 | 213 | Pfam | AP2 domain | 24 | 73 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan02g0130 | 213 | FunFam | Ethylene-responsive transcription factor 2 | 23 | 83 | - | - | |
Tan02g0130 | 213 | Gene3D | AP2/ERF domain | 23 | 83 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan02g0130 | 213 | SMART | rav1_2 | 24 | 87 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g1742 | Tan-Chr1:18603400 | Tan02g0130 | Tan-Chr2:1217897 | 9.60E-51 | dispersed | |
Tan02g0130 | Tan-Chr2:1217897 | Tan05g2453 | Tan-Chr5:75675136 | 3.70E-26 | dispersed | |
Tan02g0130 | Tan-Chr2:1217897 | Tan03g2540 | Tan-Chr3:78651979 | 1.30E-16 | wgd | |
Tan02g0130 | Tan-Chr2:1217897 | Tan05g0679 | Tan-Chr5:4924897 | 1.20E-72 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
26641 | PF00847 | AP2 | 7.90E-15 | CL0081 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan02g0130 | K09286 | - | csv:101210265 | 313.538 |