Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0133 ATGACACTCGATCATCAGTCCCAACATTCCGACCAAACTCGCAGTTCCGTCGAAGCCGATGATGATTCCGACCATCTCCATCCTACTCTTTCCACGCCTGTTGTCGTCAATGGAGCCGACTGCGAGAATGCCGGCGAAGACCTCTTCGTCCCTCCCCTGAACTTCGCCGTCGTTGACAATGGCATTTTCCGCTCCGGCTTCCCCGACTCTTCCAACTTCTCCTTCTTACAGACCTTAGGTCTTCGTTCGATTATATGTCTTTGTCCTGAGCCATATCCTGAGGCGAGCATGGATTTCCTCAAGTCGAATGGGATCCAACTGTTTCAATTCGGGATTGAAGGTACTAAGGAGCCTTTTGTGAACATTCCAGACAATACAATTCGTGAAGCACTTAAAGTTATTCTTGATGTGAGGAATCGCCCAGTTTTAATCCATTGCAAACGAGGAAAGCACCGAACCGGTTGTGTTGTGGGATGCTTTAGAAAGTTGCAGAAATGGTGCCTATCCTCAGTCTTTGATGAGTACCAGCGGTTTGCCGCTGCCAAGGCAAGAGTTTCAGATCAAAGGTTCATTGAACTATTCGATGTTTCTGGCTTGAAGCATCAGCCATCTTCTTTTTCTTGTTCCAAAAGGTAA 636 47.33 MTLDHQSQHSDQTRSSVEADDDSDHLHPTLSTPVVVNGADCENAGEDLFVPPLNFAVVDNGIFRSGFPDSSNFSFLQTLGLRSIICLCPEPYPEASMDFLKSNGIQLFQFGIEGTKEPFVNIPDNTIREALKVILDVRNRPVLIHCKRGKHRTGCVVGCFRKLQKWCLSSVFDEYQRFAAAKARVSDQRFIELFDVSGLKHQPSSFSCSKR 211
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1243190 1246146 + Tan0014494.2 Tan02g0133 742759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0133 211 ProSitePatterns Tyrosine specific protein phosphatases active site. 144 154 IPR016130 GO:0016311(InterPro)
Tan02g0133 211 PANTHER TYROSINE-PROTEIN PHOSPHATASE 12 205 - GO:0005737(PANTHER)|GO:0016791(PANTHER)
Tan02g0133 211 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 49 195 IPR029021 -
Tan02g0133 211 ProSiteProfiles Dual specificity protein phosphatase domain profile. 54 205 IPR020422 GO:0006470(InterPro)
Tan02g0133 211 Pfam Tyrosine phosphatase family 50 203 IPR004861 -
Tan02g0133 211 CDD PFA-DSP_Siw14 48 195 - -
Tan02g0133 211 Gene3D Protein tyrosine phosphatase superfamily 48 198 IPR029021 -
Tan02g0133 211 FunFam probable tyrosine-protein phosphatase At1g05000 48 198 - -
Tan02g0133 211 PRINTS Plant and fungal dual specificity phosphatase signature 105 119 IPR020428 GO:0016791(InterPro)
Tan02g0133 211 PRINTS Plant and fungal dual specificity phosphatase signature 49 66 IPR020428 GO:0016791(InterPro)
Tan02g0133 211 PRINTS Plant and fungal dual specificity phosphatase signature 86 99 IPR020428 GO:0016791(InterPro)
Tan02g0133 211 PRINTS Plant and fungal dual specificity phosphatase signature 122 136 IPR020428 GO:0016791(InterPro)
Tan02g0133 211 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0133 Tan-Chr2:1243190 Tan05g0690 Tan-Chr5:5004130 7.00E-86 dispersed
Tan02g0133 Tan-Chr2:1243190 Tan02g0134 Tan-Chr2:1243419 1.50E-117 tandem
Tan02g0133 Tan-Chr2:1243190 Tan05g0689 Tan-Chr5:5004130 7.00E-86 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0133 K18045 - csv:101209768 367.081