Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0149 ATGTTTCTATCTTTTTCTAACAATCAAAACATAAAGAGAATCACAATTCACAAATCCATTCCCACTGGAAAAAAAATGAAAACCAGTGCGGGCGGCGAGATTGTTCCGGTCCAAGGCGGCCATATTCTCCGGTCTACTGGCCGGAAAGACCGCCACAGTAAGGTCTTCACGGCCAAAGGCCCTCGTGACCGCCGTGTGAGATTGTCGGCTCACACCGCCATCCGATTCTACGATGTGCAGGACCGGTTGGGCTACGATCGGCCCAGTAAAGCCGTCGATTGGCTAATCAAGAAGGCTAAATTCGCCATTGATAAGCTTCAAGAGCTTCCCCCTTATTTCCCCATCGCCAATGGATTCGCTGACCCAAATCGGAAAACGGGAGACGGGGAAACAGAGTCCTCTGAGTTTGATTCCCAGTTGCAGTTGCCATCCGCCGCCGGAAACTTCGCTCCGTCGCTTGAATCGTTCTTTCCGACGAGCTCTGCCACTACTTCTATTAATTTCCAGGGATATCCAGTGGATTTGATTTTGAGACCCACCGACCCGGTTAGAGATCTCGCCCTATCTCTCCATAACTTTCACGATTCTCGTCTAATTCCGTCAGAGCAAGATGCGACCCCTTCGCCGGAAGATCACCAACGGCTTATCGCCGATTCGATTCCGGCAGGGTACGAAGGAGGCGACGCCGGGCTGTGGCTACAGCAGCCATTGATAGGGCAAAATTCGGCGGCGGCGTTTTCCCAGAGGGGAGCTCTTCAGGTGCCGCCGATTCGTGGTTGGAGCAATCAGAATCGACAGTCGACAGTGGGCGCCGGCCGATTTGATGGGTCGTCGGAGTTCCGTACGCCGTCGCGGCTTAGAAGTGAGTGTGGGGAAGACGGCGTCGTTTCGGTGAGTCATTCATCGTCTCCGAATTTTCGCCCGTAG 927 53.51 MFLSFSNNQNIKRITIHKSIPTGKKMKTSAGGEIVPVQGGHILRSTGRKDRHSKVFTAKGPRDRRVRLSAHTAIRFYDVQDRLGYDRPSKAVDWLIKKAKFAIDKLQELPPYFPIANGFADPNRKTGDGETESSEFDSQLQLPSAAGNFAPSLESFFPTSSATTSINFQGYPVDLILRPTDPVRDLALSLHNFHDSRLIPSEQDATPSPEDHQRLIADSIPAGYEGGDAGLWLQQPLIGQNSAAAFSQRGALQVPPIRGWSNQNRQSTVGAGRFDGSSEFRTPSRLRSECGEDGVVSVSHSSSPNFRP 308
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1344612 1346043 - Tan0001584.1 Tan02g0149 742775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0149 308 ProSiteProfiles TCP domain profile. 48 106 IPR017887 -
Tan02g0149 308 MobiDBLite consensus disorder prediction 257 273 - -
Tan02g0149 308 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 27 258 IPR005333 GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0043565(PANTHER)|GO:2000032(PANTHER)
Tan02g0149 308 MobiDBLite consensus disorder prediction 257 308 - -
Tan02g0149 308 Pfam TCP family transcription factor 47 116 IPR017887 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4342 Tan-Chr1:108372913 Tan02g0149 Tan-Chr2:1344612 6.10E-36 dispersed
Tan01g4343 Tan-Chr1:108372913 Tan02g0149 Tan-Chr2:1344612 6.10E-36 dispersed
Tan02g0149 Tan-Chr2:1344612 Tan03g2713 Tan-Chr3:80125507 7.40E-20 dispersed
Tan01g0851 Tan-Chr1:8256350 Tan02g0149 Tan-Chr2:1344612 5.50E-40 transposed
Tan02g0149 Tan-Chr2:1344612 Tan05g0714 Tan-Chr5:5078476 8.70E-37 wgd
Tan02g0149 Tan-Chr2:1344612 Tan05g2476 Tan-Chr5:75983643 2.50E-15 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
26642 PF03634 TCP 2.20E-30 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0149 - - - 0.0