Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0162 ATGGTGGATGCAATGAAGAATGTTGCAAAGCTTGATGTCGAATTGACAGTCGAGGAAAGAAACTTACTCTCTGTTGGATACAAGAATGTGGTTGGTGCAAGGAGAGCCTCATGGAGGATTTTATCATCAATAGAGCAGAAAGAAGAAGCTAAAGGAAATGAAGCAAATGCCAAACGCATCAAGGAATACAGACAAAAGGTTGAATCAGAGCTCTCTGGTATTTGTAATGATATCATGACAGTGATTGACGAGCACCTAATTCCCTCGGCTTCAGCTGGGGAATCGACAGTGTTCTACTATAAGATGAAAGGAGATTATTATCGTTACCTTGCAGAATTTAAATCTGGTAATGAGAAGAAAGATGCAGCTGATCAATCGATGAAAGCGTATGAGGCTGCAACTAGCTCAGCTGAATCTGAATTGCCTCCTACGCATCCTATCCGCTTGGGCTTGGCATTGAATTTCTCAGTCTTCTATTATGAAATCTTGAATTCACCTGAAAGGGCTTGCCATCTTGCAAAGCAAGCTTTTGATGAAGCCATCTCCGAACTCGACACTCTGAACGAGGAGTCTTACAAAGATAGCACCTTAATCATGCAGCTTCTTAGGGATAACCTCACATTATGGACTTCTGACATCCCAGAGGATGGAGATGATGCCCAAAAGATCAATGGCACTGCCAAGGTTACTGGTGGTGACGATGAGTGA 708 42.66 MVDAMKNVAKLDVELTVEERNLLSVGYKNVVGARRASWRILSSIEQKEEAKGNEANAKRIKEYRQKVESELSGICNDIMTVIDEHLIPSASAGESTVFYYKMKGDYYRYLAEFKSGNEKKDAADQSMKAYEAATSSAESELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGDDAQKINGTAKVTGGDDE 235
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1433095 1437025 - Tan0017061.1 Tan02g0162 742788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0162 235 ProSitePatterns 14-3-3 proteins signature 1. 20 30 IPR023409 -
Tan02g0162 235 PIRSF 14-3-3 1 222 IPR000308 -
Tan02g0162 235 PANTHER 14-3-3 PROTEIN 1 215 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Tan02g0162 235 ProSitePatterns 14-3-3 proteins signature 2. 192 211 IPR023409 -
Tan02g0162 235 Coils Coil 170 190 - -
Tan02g0162 235 FunFam 14-3-3 protein epsilon 1 223 - -
Tan02g0162 235 SMART 1433_4 1 223 IPR023410 -
Tan02g0162 235 Gene3D - 1 224 IPR036815 -
Tan02g0162 235 MobiDBLite consensus disorder prediction 215 235 - -
Tan02g0162 235 Pfam 14-3-3 protein 1 210 IPR023410 -
Tan02g0162 235 SUPERFAMILY 14-3-3 protein 2 219 IPR036815 -
Tan02g0162 235 PRINTS 14-3-3 protein zeta signature 14 43 IPR000308 -
Tan02g0162 235 PRINTS 14-3-3 protein zeta signature 156 182 IPR000308 -
Tan02g0162 235 PRINTS 14-3-3 protein zeta signature 63 87 IPR000308 -
Tan02g0162 235 PRINTS 14-3-3 protein zeta signature 94 116 IPR000308 -
Tan02g0162 235 PRINTS 14-3-3 protein zeta signature 183 212 IPR000308 -
Tan02g0162 235 PRINTS 14-3-3 protein zeta signature 129 155 IPR000308 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0162 Tan-Chr2:1433095 Tan02g0164 Tan-Chr2:1433095 2.80E-128 dispersed
Tan02g0162 Tan-Chr2:1433095 Tan02g0163 Tan-Chr2:1433095 2.80E-128 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0162 K06630 - csv:101208446 448.358