Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan02g0163 | ATGGCTTCCTCTAAAGACCGCGAGAACTTCGTTTACATCGCCAAGCTCGCCGAGCAGGCCGAGCGTTATGATGAAATGGTGGATGCAATGAAGAATGTTGCAAAGCTTGATGTCGAATTGACAGTCGAGGAAAGAAACTTACTCTCTGTTGGATACAAGAATGTGGTTGGTGCAAGGAGAGCCTCATGGAGGATTTTATCATCAATAGAGCAGAAAGAAGAAGCTAAAGGAAATGAAGCAAATGCCAAACGCATCAAGGAATACAGACAAAAGGTTGAATCAGAGCTCTCTGGTATTTGTAATGATATCATGACAGTGATTGACGAGCACCTAATTCCCTCGGCTTCAGCTGGGGAATCGACAGTGTTCTACTATAAGATGAAAGGAGATTATTATCGTTACCTTGCAGAATTTAAATCTGGTAATGAGAAGAAAGATGCAGCTGATCAATCGATGAAAGCGTATGAGGCTGCAACTAGCTCAGCTGAATCTGAATTGCCTCCTACGCATCCTATCCGCTTGGGCTTGGCATTGAATTTCTCAGTCTTCTATTATGAAATCTTGAATTCACCTGAAAGGGCTTGCCATCTTGCAAAGCAAGCTTTTGATGAAGCCATCTCCGAACTCGACACTCTGAACGAGGAGTCTTACAAAGATAGCACCTTAATCATGCAGCTTCTTAGGGATAACCTCACATTATGGACTTCTGACATCCCAGAGGATGGAGATGATGCCCAAAAGATCAATGGCACTGCCAAGGTTACTGGTGGTGACGATGAGTGA | 783 | 43.68 | MASSKDRENFVYIAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVVGARRASWRILSSIEQKEEAKGNEANAKRIKEYRQKVESELSGICNDIMTVIDEHLIPSASAGESTVFYYKMKGDYYRYLAEFKSGNEKKDAADQSMKAYEAATSSAESELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGDDAQKINGTAKVTGGDDE | 260 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 1433095 | 1437025 | - | Tan0017061.2 | Tan02g0163 | 742789 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan02g0163 | 260 | Pfam | 14-3-3 protein | 14 | 235 | IPR023410 | - | |
Tan02g0163 | 260 | PIRSF | 14-3-3 | 1 | 247 | IPR000308 | - | |
Tan02g0163 | 260 | Coils | Coil | 195 | 215 | - | - | |
Tan02g0163 | 260 | ProSitePatterns | 14-3-3 proteins signature 1. | 45 | 55 | IPR023409 | - | |
Tan02g0163 | 260 | SMART | 1433_4 | 7 | 248 | IPR023410 | - | |
Tan02g0163 | 260 | ProSitePatterns | 14-3-3 proteins signature 2. | 217 | 236 | IPR023409 | - | |
Tan02g0163 | 260 | PRINTS | 14-3-3 protein zeta signature | 208 | 237 | IPR000308 | - | |
Tan02g0163 | 260 | PRINTS | 14-3-3 protein zeta signature | 181 | 207 | IPR000308 | - | |
Tan02g0163 | 260 | PRINTS | 14-3-3 protein zeta signature | 154 | 180 | IPR000308 | - | |
Tan02g0163 | 260 | PRINTS | 14-3-3 protein zeta signature | 88 | 112 | IPR000308 | - | |
Tan02g0163 | 260 | PRINTS | 14-3-3 protein zeta signature | 39 | 68 | IPR000308 | - | |
Tan02g0163 | 260 | PRINTS | 14-3-3 protein zeta signature | 119 | 141 | IPR000308 | - | |
Tan02g0163 | 260 | MobiDBLite | consensus disorder prediction | 240 | 260 | - | - | |
Tan02g0163 | 260 | SUPERFAMILY | 14-3-3 protein | 6 | 237 | IPR036815 | - | |
Tan02g0163 | 260 | FunFam | 14-3-3 protein epsilon | 2 | 248 | - | - | |
Tan02g0163 | 260 | Gene3D | - | 1 | 249 | IPR036815 | - | |
Tan02g0163 | 260 | Coils | Coil | 13 | 33 | - | - | |
Tan02g0163 | 260 | PANTHER | 14-3-3 PROTEIN | 6 | 240 | IPR000308 | GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g3788 | Tan-Chr1:102710782 | Tan02g0163 | Tan-Chr2:1433095 | 4.20E-106 | dispersed | |
Tan02g0163 | Tan-Chr2:1433095 | Tan02g2393 | Tan-Chr2:92527255 | 3.80E-110 | dispersed | |
Tan02g0162 | Tan-Chr2:1433095 | Tan02g0163 | Tan-Chr2:1433095 | 2.80E-128 | tandem | |
Tan02g0163 | Tan-Chr2:1433095 | Tan02g0164 | Tan-Chr2:1433095 | 2.40E-128 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan02g0163 | K06630 | - | csv:101208446 | 492.271 |