Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0163 ATGGCTTCCTCTAAAGACCGCGAGAACTTCGTTTACATCGCCAAGCTCGCCGAGCAGGCCGAGCGTTATGATGAAATGGTGGATGCAATGAAGAATGTTGCAAAGCTTGATGTCGAATTGACAGTCGAGGAAAGAAACTTACTCTCTGTTGGATACAAGAATGTGGTTGGTGCAAGGAGAGCCTCATGGAGGATTTTATCATCAATAGAGCAGAAAGAAGAAGCTAAAGGAAATGAAGCAAATGCCAAACGCATCAAGGAATACAGACAAAAGGTTGAATCAGAGCTCTCTGGTATTTGTAATGATATCATGACAGTGATTGACGAGCACCTAATTCCCTCGGCTTCAGCTGGGGAATCGACAGTGTTCTACTATAAGATGAAAGGAGATTATTATCGTTACCTTGCAGAATTTAAATCTGGTAATGAGAAGAAAGATGCAGCTGATCAATCGATGAAAGCGTATGAGGCTGCAACTAGCTCAGCTGAATCTGAATTGCCTCCTACGCATCCTATCCGCTTGGGCTTGGCATTGAATTTCTCAGTCTTCTATTATGAAATCTTGAATTCACCTGAAAGGGCTTGCCATCTTGCAAAGCAAGCTTTTGATGAAGCCATCTCCGAACTCGACACTCTGAACGAGGAGTCTTACAAAGATAGCACCTTAATCATGCAGCTTCTTAGGGATAACCTCACATTATGGACTTCTGACATCCCAGAGGATGGAGATGATGCCCAAAAGATCAATGGCACTGCCAAGGTTACTGGTGGTGACGATGAGTGA 783 43.68 MASSKDRENFVYIAKLAEQAERYDEMVDAMKNVAKLDVELTVEERNLLSVGYKNVVGARRASWRILSSIEQKEEAKGNEANAKRIKEYRQKVESELSGICNDIMTVIDEHLIPSASAGESTVFYYKMKGDYYRYLAEFKSGNEKKDAADQSMKAYEAATSSAESELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGDDAQKINGTAKVTGGDDE 260
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1433095 1437025 - Tan0017061.2 Tan02g0163 742789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0163 260 Pfam 14-3-3 protein 14 235 IPR023410 -
Tan02g0163 260 PIRSF 14-3-3 1 247 IPR000308 -
Tan02g0163 260 Coils Coil 195 215 - -
Tan02g0163 260 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Tan02g0163 260 SMART 1433_4 7 248 IPR023410 -
Tan02g0163 260 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Tan02g0163 260 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Tan02g0163 260 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Tan02g0163 260 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Tan02g0163 260 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Tan02g0163 260 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Tan02g0163 260 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Tan02g0163 260 MobiDBLite consensus disorder prediction 240 260 - -
Tan02g0163 260 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Tan02g0163 260 FunFam 14-3-3 protein epsilon 2 248 - -
Tan02g0163 260 Gene3D - 1 249 IPR036815 -
Tan02g0163 260 Coils Coil 13 33 - -
Tan02g0163 260 PANTHER 14-3-3 PROTEIN 6 240 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3788 Tan-Chr1:102710782 Tan02g0163 Tan-Chr2:1433095 4.20E-106 dispersed
Tan02g0163 Tan-Chr2:1433095 Tan02g2393 Tan-Chr2:92527255 3.80E-110 dispersed
Tan02g0162 Tan-Chr2:1433095 Tan02g0163 Tan-Chr2:1433095 2.80E-128 tandem
Tan02g0163 Tan-Chr2:1433095 Tan02g0164 Tan-Chr2:1433095 2.40E-128 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0163 K06630 - csv:101208446 492.271