Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0176 ATGGAAGTTGAAGACGACTACCAAAGAAAACAGCAACTCGTTCTTGTGGCAATTGTCGTACTTGCCTCTCTCGCTCTCGTTTCTTTGCTCGTCGCTTTCAGCTATTACTGCTATATCACCAACAAGGTCTCTAAACGCCTCAAGATCCGCAAAAGGGCTGATCTTGAAACCGGAGGTAGTTTTGAAAATGTTAAAGAATTTTCCACGGAGAAAGGCCTCCAAGTGTTCACCTTCAAGCAGCTACATTCAGCAACCAGTGGTTTTAGCAAGTCAAATGTGGTTGGGCATGGTAGCTTTGGATATGTATATCGAGGAGTCCTCAATGATGGGAGAAAGGTCGCGATTAAGCTTATGGATCAAGCGGGGAAGCAGGGAGAGGACGAATTTAAAGTGGAGGTGGAATTGTTAAGTCGGTTTCATTCGCCATATTTGTTGGCATTGCTCGGGTATTGTTCAGATAGCAATCATAAATTGTTGGTATATGAGTTCATGGCAAATGGTGGTCTGCAAGAACATCTCTACCCTGTTAGCAGTTCAAATTCCGTCAGTGTTAAGTTGGATTGGGAAACACGGTTGAGAGTTGCGCTTGAAGCTGCCAAAGGTTTGGAGTATTTACATGAGCATGTTAGTCCCCCAGTAATTCATAGGGATTTCAAGAGTAGCAATGTAGTGTTGGACAAAAATCTTCATGCCAAGGTTTCTGATTTTGGATTGGCAAAGGTCGGCTCAGACAAAGCCGGGGGACACGTCTCCACTCGAGTATTGGGGACACAAGGATATGTTGCTCCCGAGTATGCGCTAACAGGGCATTTAACAACAAAGTCAGATGTCTATAGTTATGGAGTTGTCCTCTTGGAGCTGCTTACAGGCAGAGTTCCTGTTGATATGAAGAGAACTCCTGGGGAAGCTTCCCTTGTTTCTTGGGCTTTGCCAAGGCTGACTGATAGGGAGAAAGTGATGCATATAATGGACCCTGCATTGGAGGGTCAGTACTCCATGAAGGATGTTGTTCAAGTTGCAGCAATCGCAGCCATGTGTGTTCAACCAGAGGCGGATTACAGGCCGCTGATGGCCGATGTTGTCCAGTCACTGGTTCCACTGGTGAGAAATTACAGGGCAGCTTCAAAGATCGGTAGCAGTTCTAGTTCCAGCGCTACCAAGTCGCCTGTGGCGCACGACAATGCTAGTTGGGGAGACTGA 1200 46.33 MEVEDDYQRKQQLVLVAIVVLASLALVSLLVAFSYYCYITNKVSKRLKIRKRADLETGGSFENVKEFSTEKGLQVFTFKQLHSATSGFSKSNVVGHGSFGYVYRGVLNDGRKVAIKLMDQAGKQGEDEFKVEVELLSRFHSPYLLALLGYCSDSNHKLLVYEFMANGGLQEHLYPVSSSNSVSVKLDWETRLRVALEAAKGLEYLHEHVSPPVIHRDFKSSNVVLDKNLHAKVSDFGLAKVGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPVDMKRTPGEASLVSWALPRLTDREKVMHIMDPALEGQYSMKDVVQVAAIAAMCVQPEADYRPLMADVVQSLVPLVRNYRAASKIGSSSSSSATKSPVAHDNASWGD 399
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1551200 1554707 + Tan0000021.1 Tan02g0176 742802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0176 399 PANTHER OS01G0750732 PROTEIN 16 389 IPR050885 -
Tan02g0176 399 ProSiteProfiles Protein kinase domain profile. 88 368 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g0176 399 FunFam Receptor-like serine/threonine-protein kinase ALE2 164 385 - -
Tan02g0176 399 CDD STKc_IRAK 94 367 - -
Tan02g0176 399 Gene3D Transferase(Phosphotransferase) domain 1 164 386 - -
Tan02g0176 399 ProSitePatterns Protein kinases ATP-binding region signature. 94 116 IPR017441 GO:0005524(InterPro)
Tan02g0176 399 Pfam Protein tyrosine and serine/threonine kinase 91 364 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan02g0176 399 SUPERFAMILY Protein kinase-like (PK-like) 63 364 IPR011009 -
Tan02g0176 399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan02g0176 399 Gene3D Phosphorylase Kinase; domain 1 51 163 - -
Tan02g0176 399 FunFam Serine/threonine-protein kinase PBS1 56 163 - -
Tan02g0176 399 MobiDBLite consensus disorder prediction 378 399 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0176 Tan-Chr2:1551200 Tan02g0178 Tan-Chr2:1551200 1.20E-158 dispersed
Tan09g0261 Tan-Chr9:22595957 Tan02g0176 Tan-Chr2:1551200 4.80E-64 dispersed
Tan02g0176 Tan-Chr2:1551200 Tan02g0177 Tan-Chr2:1551200 1.20E-158 tandem
Tan03g1054 Tan-Chr3:66803726 Tan02g0176 Tan-Chr2:1551200 3.20E-48 transposed
Tan04g0167 Tan-Chr4:1269572 Tan02g0176 Tan-Chr2:1551200 1.90E-59 transposed
Tan04g2384 Tan-Chr4:82598431 Tan02g0176 Tan-Chr2:1551200 7.00E-51 transposed
Tan10g1258 Tan-Chr10:14197040 Tan02g0176 Tan-Chr2:1551200 1.00E-64 transposed
Tan10g1763 Tan-Chr10:50378493 Tan02g0176 Tan-Chr2:1551200 1.20E-58 transposed
Tan02g0176 Tan-Chr2:1551200 Tan05g2504 Tan-Chr5:76356562 1.50E-26 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67172 PF07714 PK_Tyr_Ser-Thr 1.20E-43 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0176 - - - 0.0