Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0177 ATGGATCAAGCGGGGAAGCAGGGAGAGGACGAATTTAAAGTGGAGGTGGAATTGTTAAGTCGGTTTCATTCGCCATATTTGTTGGCATTGCTCGGGTATTGTTCAGATAGCAATCATAAATTGTTGGTATATGAGTTCATGGCAAATGGTGGTCTGCAAGAACATCTCTACCCTGTTAGCAGTTCAAATTCCGTCAGTGTTAAGTTGGATTGGGAAACACGGTTGAGAGTTGCGCTTGAAGCTGCCAAAGGTTTGGAGTATTTACATGAGCATGTTAGTCCCCCAGTAATTCATAGGGATTTCAAGAGTAGCAATGTAGTGTTGGACAAAAATCTTCATGCCAAGGTTTCTGATTTTGGATTGGCAAAGGTCGGCTCAGACAAAGCCGGGGGACACGTCTCCACTCGAGTATTGGGGACACAAGGATATGTTGCTCCCGAGTATGCGCTAACAGGGCATTTAACAACAAAGTCAGATGTCTATAGTTATGGAGTTGTCCTCTTGGAGCTGCTTACAGGCAGAGTTCCTGTTGATATGAAGAGAACTCCTGGGGAAGCTTCCCTTGTTTCTTGGGCTTTGCCAAGGCTGACTGATAGGGAGAAAGTGATGCATATAATGGACCCTGCATTGGAGGGTCAGTACTCCATGAAGGATGTTGTTCAAGTTGCAGCAATCGCAGCCATGTGTGTTCAACCAGAGGCGGATTACAGGCCGCTGATGGCCGATGTTGTCCAGTCACTGGTTCCACTGGTGAGAAATTACAGGGCAGCTTCAAAGATCGGTAGCAGTTCTAGTTCCAGCGCTACCAAGTCGCCTGTGGCGCACGACAATGCTAGTTGGGGAGACTGA 849 47.11 MDQAGKQGEDEFKVEVELLSRFHSPYLLALLGYCSDSNHKLLVYEFMANGGLQEHLYPVSSSNSVSVKLDWETRLRVALEAAKGLEYLHEHVSPPVIHRDFKSSNVVLDKNLHAKVSDFGLAKVGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPVDMKRTPGEASLVSWALPRLTDREKVMHIMDPALEGQYSMKDVVQVAAIAAMCVQPEADYRPLMADVVQSLVPLVRNYRAASKIGSSSSSSATKSPVAHDNASWGD 282
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1551200 1554707 + Tan0000021.2 Tan02g0177 742803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0177 282 ProSiteProfiles Protein kinase domain profile. 1 251 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g0177 282 Gene3D Phosphorylase Kinase; domain 1 1 47 - -
Tan02g0177 282 MobiDBLite consensus disorder prediction 261 282 - -
Tan02g0177 282 Gene3D Transferase(Phosphotransferase) domain 1 48 269 - -
Tan02g0177 282 Pfam Protein tyrosine and serine/threonine kinase 4 247 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan02g0177 282 SUPERFAMILY Protein kinase-like (PK-like) 6 247 IPR011009 -
Tan02g0177 282 ProSitePatterns Serine/Threonine protein kinases active-site signature. 96 108 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan02g0177 282 PANTHER OS07G0668900 PROTEIN 2 263 - -
Tan02g0177 282 FunFam Receptor-like serine/threonine-protein kinase ALE2 47 268 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0177 Tan-Chr2:1551200 Tan09g0259 Tan-Chr9:22595957 1.80E-97 dispersed
Tan02g0176 Tan-Chr2:1551200 Tan02g0177 Tan-Chr2:1551200 1.20E-158 tandem
Tan02g0177 Tan-Chr2:1551200 Tan02g0178 Tan-Chr2:1551200 8.20E-159 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67173 PF07714 PK_Tyr_Ser-Thr 2.80E-36 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0177 - - - 0.0