Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan02g0189 | ATGGACCGCCGTGTTCTTACTAACCCATTTCTCTCCGAGCAAGAAGATCCTGGAGCCACGTCGGACGACGGCCTGCCGGACTCCCCCTCCGACGGCAATGACTCTAAACCCGCCGTCGGCCCCCCGCCCAAAAAGAGTAGAAGGGGAGTGCAGAAAAGAGTGGTGTCCGTACCGATCGGTGACGTGGAGGGATCTAAGAGCAAAGGGGAAGCATATCCACCGTCCGATTCGTGGGCTTGGAGGAAATACGGCCAAAAGCCAATCAAAGGCTCTCCTTATCCCAGGGGATATTACCGATGTAGTAGCTCCAAGGGCTGCCCGGCAAGAAAGCAAGTAGAGAGAAGCCGTGTGGACCCCACCAAGCTCGTTATCACCTACGCTTTCGACCACAACCACCAACTCCCGCCCACCAAATCTCACCACCACCACAATTCCTCGCCGTGCTCCGTCGCGATCGCCGCCGCAGCCGCCGACGACTCGTCTCCGGGGAGCACAACGACGTCATCCTGCACTTCCTCCGGCGACCACACTAACGCCACTCCCACGTCGCCGGCGAAGTTCGAGGAGGCGGCGGCGGTTTTCTCGAGTCAACCGGAACTGGAACTCGGCGGCGACTTGCTGATGATAAAACCCTGCATAGGCGATTTTGGATGGTTTGCTGACGTGGCGTACGATAGAATTCTGGAGGGCCCGTTTGGCGGGGGAGGCGACATATTCGACGACGCCGATGTAATGGTTTTGTCGACAATAGGAGATGACGAGGACGAGTCGTTATTTGCGGATCTTGGGGAATTACCCGAAGGCTCTGTGGTATTCGGCCGGCGGCGAGCGGTCCAACCGGACGGACCGAACCGGAAATGTGGCAGAGTTTTAGACTGCTAG | 882 | 58.16 | MDRRVLTNPFLSEQEDPGATSDDGLPDSPSDGNDSKPAVGPPPKKSRRGVQKRVVSVPIGDVEGSKSKGEAYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTKLVITYAFDHNHQLPPTKSHHHHNSSPCSVAIAAAAADDSSPGSTTTSSCTSSGDHTNATPTSPAKFEEAAAVFSSQPELELGGDLLMIKPCIGDFGWFADVAYDRILEGPFGGGGDIFDDADVMVLSTIGDDEDESLFADLGELPEGSVVFGRRRAVQPDGPNRKCGRVLDC | 293 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 1645551 | 1648358 | + | Tan0016872.1 | Tan02g0189 | 742815 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan02g0189 | 293 | FunFam | WRKY transcription factor 65 | 61 | 135 | - | - | |
Tan02g0189 | 293 | MobiDBLite | consensus disorder prediction | 159 | 183 | - | - | |
Tan02g0189 | 293 | MobiDBLite | consensus disorder prediction | 1 | 86 | - | - | |
Tan02g0189 | 293 | Gene3D | WRKY domain | 62 | 136 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan02g0189 | 293 | SMART | WRKY_cls | 74 | 134 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan02g0189 | 293 | Pfam | WRKY DNA -binding domain | 76 | 133 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan02g0189 | 293 | SUPERFAMILY | WRKY DNA-binding domain | 70 | 135 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Tan02g0189 | 293 | MobiDBLite | consensus disorder prediction | 156 | 183 | - | - | |
Tan02g0189 | 293 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 26 | 188 | IPR044810 | GO:0000976(PANTHER)|GO:0003700(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER) | |
Tan02g0189 | 293 | ProSiteProfiles | WRKY domain profile. | 75 | 135 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan02g0189 | Tan-Chr2:1645551 | Tan03g2814 | Tan-Chr3:81078287 | 2.60E-30 | dispersed | |
Tan02g0189 | Tan-Chr2:1645551 | Tan05g2522 | Tan-Chr5:76564847 | 1.10E-41 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
26645 | PF03106 | WRKY | 1.10E-24 | CL0274 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan02g0189 | - | - | - | 0.0 |