Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0192 ATGATTTCGAGATCGTACACAAATCTTTTAGATTTGGCTTCTGGAAATTTTCCAGCAATGGAAGTGAAAAGGAAGCGGTTTCCTCGGGTAATGACTGTTCCGGGTAACGTAGCTGAGCTTGATGACGATCAGGCATACAGTGTGACATCTGAAAACCCATCATCAATTTCCACAGATCGGATGATAATTGTAGCAAACCAGCTTCCTTTGAGAGCAAGACGAAGGGAAGATGATAATTCCTGGAGTTTCAGTTGGAATGAAGATTCGCTGCTTTTGCAGCTTAAAGATGGTTTACCAGAAGATATGGAGGTTCTTTATGTTGGTTCGCTGAAAGTCGATATCCAACCGGAGGAGCAAGATGAGGTTTCCCAAATTTTGTTGGAGAAATTTAAGTGTATTCCTACATTTTTGCCTCCTCATATTTTGGAAAAGTTTTATGATGGTTTCTGCAAGAGGAATTTGTGGCCTCTTTTTCATTACATGCTGCCATATTCTGCTGATCAGAAGGGTCGATTTGATCGCTGCATGTGGGAAGCCTATGTATCAGCAAATAAGTTATTTTTCCAGAAAGTAGTTGAGGTCATCAACCCAGATGATGACTATATCTGGATCCACGATTACCATTTGATGGTATTGCCAACTTTCTTGAGGAGGCGCTTTAACAGAGTTAAAATGGGATTTTTCCTTCATAGTCCATTTCCTTCATCTGAGATCTACCGTACCCTTCCTGTCAGAGAAGAGATTCTCAAGGCACTACTTAACTCTGATATCATTGGATTTCACACTTTTGATTATGCTCGTCATTTCCTCTCTTGTTGCAGCCGAATGTTGGGTTTGGAATACCAGTCAAAGAGGGGCTATCTTGGATTGGAATACTATGGCAGGACGATCGGGATAAAGATAATGCCTGTTGGTATACATATGAGTCGGATTGAATCGGTGATGAAACTGGCAGATGAGGATGTTAAGACTAGGGAACTCACACAGCAATTTGCAGGGAAAACGGTGTTGCTTGGTGTTGATGATATGGACATTTTCAAAGGTATCAACCTGAAATTATTAGCTATGGAGCAGGTACTTAAGCAACATCCAAAGTGGCAGGGAAAGGCCGTATTGATCCAAATTGTAAATCCTGCCAGAGGCAAAGGCAGAGATTTACAAGAAATAGAAGATGAAATAAAAGAAAGCTGCAGTAGGATCAACAAGGAATATGGGCATCCTGGCTATGAGCCAATCGTACTTCTCAACAGGCACGTGCCAATTACTGAAAGGGTTGCTTATTATAGCATTGCTGAGTGTGTAGTTGTAACTGCTGTTAGAGATGGGATGAACTTAACTCCGTATGAGTACGTTGTCTGTAGACAGGGAATATCCTCCCAAAAATGTTTAAACTTCAGCGGACCAAATAAGAGCATGCTCGTCTTATCCGAATTTATTGGATGTTCTCCATCACTGAGTGGAGCATTTCGTGTCAATCCATGGAATGTTGAAAGGACAGCAGAGGCTTTGAATGAAGCAATCTCAATGGCTGATACGGAGAAGCAGTTGCGACATGAGAAGCATTACCGTTATGTTGCTACCCACGATGTGGCTTATTGGTCTCGTAGTTTCTTGCAAGATATGGAGAGAACTTGCTCAGAACATTTCAGGAGACGATGTTGGGGAATTGGTTTTAGTTTTGGTTTCAGAGTTGTCGCTCTTGATCCAAATTTCAGAAAACTTTCAGTAGATGCCATTGTCTCAGCTTACAGTAGAGCTGAAAGTCGGGCCATTCTTTTAGACTATGATGGCACTGTGATGCCCCAAAACTCCATAAATAAGTCACCAAGTCAGCAGGTTATCTCTATCCTTAATACGCTTTGTGCAGATGCAAAAAATGTAGTCTTCATCGTGAGTGGACGAGGGAGGGACAGCTTAAGCAAGTGGTTTCGCCCATGCAAGAAGCTTGGAATTGCAGCAGAACATGGATATTTTTTGAGGCAGTCAATGAATGAGGAGTGGAAGATCTGCGGCCAAAGTTCTGATTTTGGATGGATGCAGATTGCCGAACCTGTTATGAAATTATATACCGAGGCTACTGATGGTTCTTCTATTGAAAGAAAGGAAAGTGCTTTGGTCTGGCAGTATCGAGATGCAGATCCTAGTTTTGGATCTTCCCAGGCAAAGGAAATGCTGGATCATTTAGAGAGTGTTATGGCAAACGAACCGGTTGCAGTCAAAAGCGGCCAATTCATCGTAGAAGTGAAACCGCAGGGGGTTACCAAGGGCCTTGTGGCTGAAAAGATCTTTTCATCAATGGCGGAAGATGGAAAACTTGCTGACTTCGTGCTGTGTATTGGCGACGACAGATCTGATGAGGACATGTTTGAAATAATTGGTAATGCATTGTCCAGTAATATTCTTTCTCCAACGACATCAGTTTTTGCCTGCACTGTTGGACAAAAGCCAAGCAAAGCCAAATATTATTTAGATGACACAGCTGAAGTGATAGGCATGCTAGAATACTTGGCCGAAGCTTCTAGCCCATTGCCATCCTCCGACGATGAAGACCGTGAAAACGCTTCTTGA 2568 42.37 MISRSYTNLLDLASGNFPAMEVKRKRFPRVMTVPGNVAELDDDQAYSVTSENPSSISTDRMIIVANQLPLRARRREDDNSWSFSWNEDSLLLQLKDGLPEDMEVLYVGSLKVDIQPEEQDEVSQILLEKFKCIPTFLPPHILEKFYDGFCKRNLWPLFHYMLPYSADQKGRFDRCMWEAYVSANKLFFQKVVEVINPDDDYIWIHDYHLMVLPTFLRRRFNRVKMGFFLHSPFPSSEIYRTLPVREEILKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTIGIKIMPVGIHMSRIESVMKLADEDVKTRELTQQFAGKTVLLGVDDMDIFKGINLKLLAMEQVLKQHPKWQGKAVLIQIVNPARGKGRDLQEIEDEIKESCSRINKEYGHPGYEPIVLLNRHVPITERVAYYSIAECVVVTAVRDGMNLTPYEYVVCRQGISSQKCLNFSGPNKSMLVLSEFIGCSPSLSGAFRVNPWNVERTAEALNEAISMADTEKQLRHEKHYRYVATHDVAYWSRSFLQDMERTCSEHFRRRCWGIGFSFGFRVVALDPNFRKLSVDAIVSAYSRAESRAILLDYDGTVMPQNSINKSPSQQVISILNTLCADAKNVVFIVSGRGRDSLSKWFRPCKKLGIAAEHGYFLRQSMNEEWKICGQSSDFGWMQIAEPVMKLYTEATDGSSIERKESALVWQYRDADPSFGSSQAKEMLDHLESVMANEPVAVKSGQFIVEVKPQGVTKGLVAEKIFSSMAEDGKLADFVLCIGDDRSDEDMFEIIGNALSSNILSPTTSVFACTVGQKPSKAKYYLDDTAEVIGMLEYLAEASSPLPSSDDEDRENAS 855
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1658752 1661997 + Tan0009016.1 Tan02g0192 742818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0192 855 FunFam Alpha,alpha-trehalose-phosphate synthase 314 526 - -
Tan02g0192 855 NCBIfam HAD-IIB family hydrolase 591 795 IPR006379 -
Tan02g0192 855 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 53 312 - -
Tan02g0192 855 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 588 705 - -
Tan02g0192 855 Gene3D - 717 850 IPR023214 -
Tan02g0192 855 Gene3D - 588 689 IPR023214 -
Tan02g0192 855 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 24 839 IPR001830 GO:0003824(InterPro)|GO:0004805(PANTHER)|GO:0005829(PANTHER)|GO:0005992(InterPro)|GO:0005992(PANTHER)|GO:0070413(PANTHER)
Tan02g0192 855 CDD HAD_TPP 590 829 - -
Tan02g0192 855 Gene3D Glycogen Phosphorylase B; 314 526 - -
Tan02g0192 855 FunFam Trehalose-6-phosphate synthase 2 672 751 - -
Tan02g0192 855 Gene3D Glycogen Phosphorylase B; 53 313 - -
Tan02g0192 855 CDD GT20_TPS 60 542 IPR001830 GO:0003824(InterPro)|GO:0005992(InterPro)
Tan02g0192 855 NCBIfam trehalose-phosphatase 587 837 IPR003337 GO:0005992(InterPro)
Tan02g0192 855 Pfam Glycosyltransferase family 20 60 542 IPR001830 GO:0003824(InterPro)|GO:0005992(InterPro)
Tan02g0192 855 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 545 - -
Tan02g0192 855 SUPERFAMILY HAD-like 589 837 IPR036412 -
Tan02g0192 855 Pfam Trehalose-phosphatase 592 826 IPR003337 GO:0005992(InterPro)
Tan02g0192 855 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 718 849 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0192 Tan-Chr2:1658752 Tan03g2599 Tan-Chr3:79127018 0.00E+00 dispersed
Tan05g2550 Tan-Chr5:76870066 Tan02g0192 Tan-Chr2:1658752 2.70E-121 transposed
Tan02g0192 Tan-Chr2:1658752 Tan03g2598 Tan-Chr3:79127018 0.00E+00 wgd
Tan02g0192 Tan-Chr2:1658752 Tan05g0748 Tan-Chr5:5381250 3.40E-248 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0192 K16055 - csv:101209914 1675.6