Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0200 ATGACCACCGGAAGAGAAATTCTCCACAAAATGAAGGTGAAGGCTGGGTTTTGTTCATCAGCAGCGGATACAGGAGGGAAAGGCAAAGGGAAAGTGATGAAGAATAATATAATTAGTCATGGGAGTCATTTGGTGAAAGGCAAAACCAATCATCCTATGGAAGATTATTTGGTTTCTGATTTCAAGCGAATCAAAGAACATGATTTGGGTTTGTTTGCCATTTTTGATGGCCATTTGGGCCATGATGTTGCCAATTTTTTGCAGAATAATCTCTTTCATAATATCCTCAAAGAGGCTGATTTCTGGAGCGAAACAAGAAAGGCCATAAAAAGAGCTTACAAGAAAACAGACGCTGAAATATTAGATAAAGTGAAGCAACTGGGAAGAGGAGGATCAACGGCTGTAACCGCCATATTGATCGACGGCCAGAAACTCGTCGTTGCCAACGTCGGTGATTCTAGAGCCGTTTTGTGCAAAAACGGCGTCGCTCAGCAACTTTCCGTTGACCACGAACCCAGCAAAGAAAAAAGGGAAATTGAAAGCCGTGGTGGCTTTGTATCAAATCTTCCAGGGGACGTTCCACGTGTCGATGGACAATTGGCTGTTGCCAGAGCATTTGGAGATAAAAGCTTGAAACTCCACCTCAGCTCAGAACCTGACGTGGAAGTCATAACGGTGGATGAAACTACAGAGTTCATGATTTTGGCTAGCGATGGCATTTGGAAGGTAATGACAAACAAAGAGGCAGTAGAATCTATTAGACACATAAAGGACGCCAACTTAGCGGCCAAACGACTTATCGACGAAGCAGTATCTAGAAAAAGCAAGGACGACATATCGTGCATTGTTGTTAGGTTTCAGTAA 864 43.06 MTTGREILHKMKVKAGFCSSAADTGGKGKGKVMKNNIISHGSHLVKGKTNHPMEDYLVSDFKRIKEHDLGLFAIFDGHLGHDVANFLQNNLFHNILKEADFWSETRKAIKRAYKKTDAEILDKVKQLGRGGSTAVTAILIDGQKLVVANVGDSRAVLCKNGVAQQLSVDHEPSKEKREIESRGGFVSNLPGDVPRVDGQLAVARAFGDKSLKLHLSSEPDVEVITVDETTEFMILASDGIWKVMTNKEAVESIRHIKDANLAAKRLIDEAVSRKSKDDISCIVVRFQ 287
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1718196 1721384 - Tan0012327.1 Tan02g0200 742826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0200 287 PANTHER PROTEIN PHOSPHATASE 35 284 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Tan02g0200 287 FunFam Probable protein phosphatase 2C 39 28 287 - -
Tan02g0200 287 Pfam Protein phosphatase 2C 50 279 IPR001932 -
Tan02g0200 287 SMART PP2C_SIG_2 44 286 IPR001932 -
Tan02g0200 287 SMART PP2C_4 29 284 IPR001932 -
Tan02g0200 287 CDD PP2Cc 38 286 IPR001932 -
Tan02g0200 287 ProSiteProfiles PPM-type phosphatase domain profile. 39 286 IPR001932 -
Tan02g0200 287 Gene3D - 32 287 IPR036457 -
Tan02g0200 287 SUPERFAMILY PP2C-like 33 286 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0200 Tan-Chr2:1718196 Tan11g1206 Tan-Chr11:9994268 6.60E-47 dispersed
Tan02g0200 Tan-Chr2:1718196 Tan02g0201 Tan-Chr2:1718196 3.20E-142 tandem
Tan01g0142 Tan-Chr1:1319155 Tan02g0200 Tan-Chr2:1718196 1.30E-44 transposed
Tan01g0513 Tan-Chr1:4755466 Tan02g0200 Tan-Chr2:1718196 3.00E-84 transposed
Tan01g3523 Tan-Chr1:100383347 Tan02g0200 Tan-Chr2:1718196 7.00E-52 transposed
Tan01g3787 Tan-Chr1:102701702 Tan02g0200 Tan-Chr2:1718196 1.40E-89 transposed
Tan03g2792 Tan-Chr3:80906878 Tan02g0200 Tan-Chr2:1718196 5.70E-64 transposed
Tan06g2397 Tan-Chr6:76260356 Tan02g0200 Tan-Chr2:1718196 1.70E-28 transposed
Tan01g4380 Tan-Chr1:108802212 Tan02g0200 Tan-Chr2:1718196 8.10E-106 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0200 K17506 - csv:101211399 500.36