Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0201 ATGAAGAATAATATAATTAGTCATGGGAGTCATTTGGTGAAAGGCAAAACCAATCATCCTATGGAAGATTATTTGGTTTCTGATTTCAAGCGAATCAAAGAACATGATTTGGGTTTGTTTGCCATTTTTGATGGCCATTTGGGCCATGATGTTGCCAATTTTTTGCAGAATAATCTCTTTCATAATATCCTCAAAGAGGCTGATTTCTGGAGCGAAACAAGAAAGGCCATAAAAAGAGCTTACAAGAAAACAGACGCTGAAATATTAGATAAAGTGAAGCAACTGGGAAGAGGAGGATCAACGGCTGTAACCGCCATATTGATCGACGGCCAGAAACTCGTCGTTGCCAACGTCGGTGATTCTAGAGCCGTTTTGTGCAAAAACGGCGTCGCTCAGCAACTTTCCGTTGACCACGAACCCAGCAAAGAAAAAAGGGAAATTGAAAGCCGTGGTGGCTTTGTATCAAATCTTCCAGGGGACGTTCCACGTGTCGATGGACAATTGGCTGTTGCCAGAGCATTTGGAGATAAAAGCTTGAAACTCCACCTCAGCTCAGAACCTGACGTGGAAGTCATAACGGTGGATGAAACTACAGAGTTCATGATTTTGGCTAGCGATGGCATTTGGAAGGTAATGACAAACAAAGAGGCAGTAGAATCTATTAGACACATAAAGGACGCCAACTTAGCGGCCAAACGACTTATCGACGAAGCAGTATCTAGAAAAAGCAAGGACGACATATCGTGCATTGTTGTTAGGTTTCAGTAA 768 42.45 MKNNIISHGSHLVKGKTNHPMEDYLVSDFKRIKEHDLGLFAIFDGHLGHDVANFLQNNLFHNILKEADFWSETRKAIKRAYKKTDAEILDKVKQLGRGGSTAVTAILIDGQKLVVANVGDSRAVLCKNGVAQQLSVDHEPSKEKREIESRGGFVSNLPGDVPRVDGQLAVARAFGDKSLKLHLSSEPDVEVITVDETTEFMILASDGIWKVMTNKEAVESIRHIKDANLAAKRLIDEAVSRKSKDDISCIVVRFQ 255
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1718196 1721384 - Tan0012327.2 Tan02g0201 742827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0201 255 SMART PP2C_4 3 252 IPR001932 -
Tan02g0201 255 PANTHER PROTEIN PHOSPHATASE 8 252 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Tan02g0201 255 Gene3D - 2 255 IPR036457 -
Tan02g0201 255 ProSiteProfiles PPM-type phosphatase domain profile. 7 254 IPR001932 -
Tan02g0201 255 CDD PP2Cc 6 254 IPR001932 -
Tan02g0201 255 SMART PP2C_SIG_2 12 254 IPR001932 -
Tan02g0201 255 SUPERFAMILY PP2C-like 3 254 IPR036457 -
Tan02g0201 255 Pfam Protein phosphatase 2C 18 247 IPR001932 -
Tan02g0201 255 FunFam Probable protein phosphatase 2C 39 1 255 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3787 Tan-Chr1:102701702 Tan02g0201 Tan-Chr2:1718196 5.20E-89 dispersed
Tan01g4380 Tan-Chr1:108802212 Tan02g0201 Tan-Chr2:1718196 1.40E-97 dispersed
Tan02g0201 Tan-Chr2:1718196 Tan03g2792 Tan-Chr3:80906878 1.30E-62 dispersed
Tan02g0200 Tan-Chr2:1718196 Tan02g0201 Tan-Chr2:1718196 3.20E-142 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0201 K17506 - csv:101211399 452.595