Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0218 ATGGAGAAATCTCTGCTCGGTGGAGAAAGTAGCAGTAGCTCCAGCTCTCGACGTCAGATTCCTCATGTGAGGTTCAACCGCCGCTCCGACGCCATCGCTTATGGCTCTGCGTACCAAAGAGCTGCTGCTCTCGTGGATCTGGCTGAAGATGGCGTTGGTATACCGGAGAAAATTCTTGATCAATCGAACTTTCAGAGTGCTGCAAAACTCTACTTCATTTTTATTAAATTTGATTTGATTTGGTCCTTAAATTTCTTTGCACTGATAGTCCTAAATTTCTTTGAGAAACCCTTGTGGTGCTCCAAATACAATACGCATTCTTGTAACGACAGGGAGTATTTCTTTCTTGGGCAGTTGCCGTACTTAACAGCTGTTGAATCTCTTATATATGAGGCTGTGACTCTCATAATTCTCATAATACACACATTTTTCCCAATTTCGTATGAAGGTGCCCAGCTTTATTGGAAAAATCCCTTGAACCAGTTGAAGGTCATTTGCACAATTATTTTGGTAGCCGATTTTCTCATTTATATCCTATATTTGTCGCCAGTGGCCTTTGATTATCTTCCATTCAGAGTTGCACCATATATTAGAGTTGTCTTTTTCATCATGAATATCAGGCATCTACGGGAGAGCATCATCATCCTGGCTGGAATGCTTGGCACATACTTGAATGTCTTGGCTCTATGGTTTTTGTTTCTTCTGTTTTCCAGCTGGTTGGCATATGTTATTTTTGAGGATACACAGCAGGGGAAAATAATATTTACTTCTTTTGGAGCCACATTATATCAAATGTTTATTTTGTTCACAACATCCAATAGTCCAGATGTTTGGATACCTGCCTACAAGGCATCTCGTTGGTACTGCCTCTTTTTTGTTCTTTACGTGCTGTTGGGAGTTTACTTCGTTACAAACTTGATTCTTGCTGTTGTATACGATAGCTTTAAGAGTCAGCTTGCTAAACAAATTTCTGAGATGGACCGCTTGAGGAAAAGTATATTGGCCAAAGCATTTAGCCTTATGGATACTAATAAGGTTGGGTTTATCAATAAAGAGCAGTGCCTTATACTTCTTGAAGAACTTAACCAATACAGGACTTTGCCGAAAATATCAAGGGATGATTATGAGTTAATATTTGATGAGCTGGATGACAGTCGTGATTTTAAGATTAATATGAATGAGTTTGCTGATTTTTGCAATGCTATAGCCTTGAAGTTCCAGAAGGAGGACATTCCTTCATGGTTTGAAGGGTATCCTTCGATCTACCATTCAGCTTTATCAAAAAAGTTGAAAGCATTTGTGCGGAGCCCCACATTTGGATATGCTATATCCTTTATCCTCATACTGAACCTGGTTGCTGTTATTATTGAAACAACACTTGATATAGAAAACAATGTTGGTCAGAAAGCATGGCAAGAACTCGAGTTTGTATTTGGTTGGATATATGTAGTTGAAATGGGTCTAAAAATCTACGCATTTGGGTTTTTGAATTATTGGAGAGATGGTCAAAATCAGTTTGATTTCCTTGTCACGTGGATTATAGTGATTGGAGAAACTTTAACTTTTGTGGCACCTAGTGGATTAACTTTTCTTTCAAATGGAGAATGGATTCGCTACCTTCTGATAGCAAGAATGTTACGGCTGATAAGGCTCCTAATGCATGTCCGGCAATATCGAGCATTTCTTGCTACCTTTTTAACTCTCATCCCTAGTTTGATGCCATATCTAGGAACTATTTTCTGTGTCCTCTGTCTTTATTGCACTCTTGGTGTGCAGGTCTTTGGAGGAATCGTCAATGCTGGAAATGCCACTTTGTCTAAGACTGATCTGAATGATGATGACTACCTACTTTTCAATTTCAACGACTATCCTAATGGCATGGTGACACTGTTCAATTTGCTAGTTATGGGTAACTGGCAAGACTGGATGCAGAGCTACAAGGAATTAACAGGAAGTATTTGGACCCTCGTTTATTTTATCAGTTTCTACCTAATAACCGTTTTGCTGCTCTTAAATTTGGTTGTAGCTTTTGTCTTGGAGGCATTCTTTGCTGAATTGGATATTGAATCTTCAGAAAATGGTGAAGAACAGGCTCAGGACGGAGATAGTAGAAAGGATCATCGACGTTTCGTTGGCACAAAATCTCGGAGCCGCAAAGTTGACATTCTTCTCCATCATATGTTGAGTGCAGAATTGGATGAAAAGGATTCCGATTAG 2217 39.29 MEKSLLGGESSSSSSSRRQIPHVRFNRRSDAIAYGSAYQRAAALVDLAEDGVGIPEKILDQSNFQSAAKLYFIFIKFDLIWSLNFFALIVLNFFEKPLWCSKYNTHSCNDREYFFLGQLPYLTAVESLIYEAVTLIILIIHTFFPISYEGAQLYWKNPLNQLKVICTIILVADFLIYILYLSPVAFDYLPFRVAPYIRVVFFIMNIRHLRESIIILAGMLGTYLNVLALWFLFLLFSSWLAYVIFEDTQQGKIIFTSFGATLYQMFILFTTSNSPDVWIPAYKASRWYCLFFVLYVLLGVYFVTNLILAVVYDSFKSQLAKQISEMDRLRKSILAKAFSLMDTNKVGFINKEQCLILLEELNQYRTLPKISRDDYELIFDELDDSRDFKINMNEFADFCNAIALKFQKEDIPSWFEGYPSIYHSALSKKLKAFVRSPTFGYAISFILILNLVAVIIETTLDIENNVGQKAWQELEFVFGWIYVVEMGLKIYAFGFLNYWRDGQNQFDFLVTWIIVIGETLTFVAPSGLTFLSNGEWIRYLLIARMLRLIRLLMHVRQYRAFLATFLTLIPSLMPYLGTIFCVLCLYCTLGVQVFGGIVNAGNATLSKTDLNDDDYLLFNFNDYPNGMVTLFNLLVMGNWQDWMQSYKELTGSIWTLVYFISFYLITVLLLLNLVVAFVLEAFFAELDIESSENGEEQAQDGDSRKDHRRFVGTKSRSRKVDILLHHMLSAELDEKDSD 738
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1883479 1910039 - Tan0009797.1 Tan02g0218 742844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0218 738 SUPERFAMILY EF-hand 325 417 IPR011992 -
Tan02g0218 738 ProSiteProfiles EF-hand calcium-binding domain profile. 329 364 IPR002048 GO:0005509(InterPro)
Tan02g0218 738 Gene3D - 317 401 - -
Tan02g0218 738 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 1 737 IPR044581 GO:0000325(PANTHER)|GO:0005245(InterPro)|GO:0005245(PANTHER)|GO:0005774(PANTHER)|GO:0006816(PANTHER)
Tan02g0218 738 ProSiteProfiles EF-hand calcium-binding domain profile. 370 405 IPR002048 GO:0005509(InterPro)
Tan02g0218 738 FunFam Two pore calcium channel protein 1 429 561 - -
Tan02g0218 738 Gene3D - 562 720 - -
Tan02g0218 738 Gene3D - 208 316 - -
Tan02g0218 738 SUPERFAMILY Voltage-gated potassium channels 436 682 - -
Tan02g0218 738 Pfam Ion transport protein 437 682 IPR005821 GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan02g0218 738 Pfam Ion transport protein 129 318 IPR005821 GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan02g0218 738 MobiDBLite consensus disorder prediction 1 20 - -
Tan02g0218 738 FunFam Two pore calcium channel protein 1 208 319 - -
Tan02g0218 738 Gene3D - 428 561 IPR027359 -
Tan02g0218 738 SMART efh_1 333 361 IPR002048 GO:0005509(InterPro)
Tan02g0218 738 SMART efh_1 374 402 IPR002048 GO:0005509(InterPro)
Tan02g0218 738 FunFam Two pore calcium channel protein 1 562 719 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0218 K16900 - csv:101206980 1304.66