Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0240 ATGGGTGGTTGTGTCTCTACAAGCAGCCATAGTACGTGTAGTAGCCAGAGTAATGGGGAATCAGTTTCTTCCTCATGTATGGGAATTGGATTTCGAGGACGAAAGCGAACCAAAAGAACGTTCTCCGACCATGTTTACGCTCTTCAGAATCTTCCTTCAGCTCCCAACAGGATCTTCATGAATGGAAAAAGTCGTTCTTCTTGCATTTTCACACAACAAGGTCGCAAGGGAATCAACCAGGACGCCATGGTTGTGTGGGAAGATTTCATGTCCGAGGACACGATCTTTTGTGGTGTGTTCGATGGTCATGGACCTTACGGTCATCTGGTTGCTCGAAAAGTGAGGGATACATTGCCCATAAAGTTGCTGTCATTCTTCCAGTCTCCTCAGTTGAAGCAAAATGACTCTGGTAAAACCTGTTTTCAGAGGAATTTGAAGACACCTTCAGATTGTGAAGATTCTGAGAAGGATGGTTTTGTTGAGGACTCGCAGAATTCAGTATGGAGAGATGCGTTTTTGAACTCGTATAAAGCTATGGATAAGGAGTTGAGATCACATCCTAATCTGGACTGCTTTTGTAGTGGTAGTACTGCAGTCACCATAGTTAAACAGGGGTCAAATCTCTTCATGGGGTACATAGGGGACTCTCGAGCAATCCTTGCTTCAAAGGATGCCAACGATTCCACTGTGGCGGTCCAATTGACCGTGGATCTTAAGCCAGATTTGCCGAGAGAGGCTGAAAGAATAAAAAGGTGTAAAGGTAGGGTCTTTGCATTGCAAGATGAGCCTGAAGTGCCAAGGGTATGGTTACCTTTCGACGATGCGCCCGGTTTAGCAATGGCTCGAGCATTTGGTGATTTCTGTTTGAAAGAATATGGAGTTATCTCTATACCTGAATTCTCTCATCGAACCCTCACCGACGCTGATCAGTTCATTGTTCTTGCATCAGATGGGGTATGGGATGTGTTGAGCAATGAAGAGGTGGTTGACATAGTGTCCTCGGCCCCAACTCGCTCGTCTGCTGCGAGGTCCGTGGTTGACTCTGCTGCTCGTGAATGGAAACTCAAATACCCTACCTCAAAAATGGATGACTGCGCTGTCGTCTGCTTATTTTTGGATGGGAGGATGGACTCTGAATCTGACTGTGACGAACAAGGCTTCTCATCTGCAACATTGCGTAGTAATCATTCGGGTACTGCTGTCGAATCCGATGATGGCCAGAGGTCTGAGCCATGCTTGCAAAGGAACAACACTGTCAGATCATCCGAAGAAAACAATACTTTCGGGGGATTACCTGTTGACGACGGGGAGATTGGTGATGCTGTACCTGCAGAAGATCAAAATTGGTCGGGTTTAGAAGGAGTCACCCGAGTAAACTCGCTTGTTCAGCTTCCTAGATTCTCTGAAGAAAGGCCAGTGTCACAGGTTTTATAA 1434 46.16 MGGCVSTSSHSTCSSQSNGESVSSSCMGIGFRGRKRTKRTFSDHVYALQNLPSAPNRIFMNGKSRSSCIFTQQGRKGINQDAMVVWEDFMSEDTIFCGVFDGHGPYGHLVARKVRDTLPIKLLSFFQSPQLKQNDSGKTCFQRNLKTPSDCEDSEKDGFVEDSQNSVWRDAFLNSYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMGYIGDSRAILASKDANDSTVAVQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRTLTDADQFIVLASDGVWDVLSNEEVVDIVSSAPTRSSAARSVVDSAAREWKLKYPTSKMDDCAVVCLFLDGRMDSESDCDEQGFSSATLRSNHSGTAVESDDGQRSEPCLQRNNTVRSSEENNTFGGLPVDDGEIGDAVPAEDQNWSGLEGVTRVNSLVQLPRFSEERPVSQVL 477
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2098199 2101253 + Tan0010906.1 Tan02g0240 742866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0240 477 Gene3D - 57 374 IPR036457 -
Tan02g0240 477 Pfam Protein phosphatase 2C 167 350 IPR001932 -
Tan02g0240 477 MobiDBLite consensus disorder prediction 383 447 - -
Tan02g0240 477 SUPERFAMILY PP2C-like 56 374 IPR036457 -
Tan02g0240 477 FunFam probable protein phosphatase 2C 52 57 375 - -
Tan02g0240 477 PANTHER PROTEIN PHOSPHATASE 67 371 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Tan02g0240 477 SMART PP2C_4 55 370 IPR001932 -
Tan02g0240 477 MobiDBLite consensus disorder prediction 383 428 - -
Tan02g0240 477 ProSiteProfiles PPM-type phosphatase domain profile. 66 372 IPR001932 -
Tan02g0240 477 MobiDBLite consensus disorder prediction 1 25 - -
Tan02g0240 477 CDD PP2Cc 65 372 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4645 Tan-Chr1:112317390 Tan02g0240 Tan-Chr2:2098199 2.60E-77 dispersed
Tan02g0240 Tan-Chr2:2098199 Tan02g1435 Tan-Chr2:55688458 7.00E-118 dispersed
Tan06g2592 Tan-Chr6:78582916 Tan02g0240 Tan-Chr2:2098199 2.50E-24 transposed
Tan02g0240 Tan-Chr2:2098199 Tan05g0797 Tan-Chr5:6018331 1.20E-189 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0240 - - - 0.0