Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0248 ATGGGTTGGAAGAGATCTTCGAGGAATGACAATTTGAGGATCTGGGTTCAGGTTTTTGTCGGATTCGTGATCTGCGCAGCACAAGTTCTTTTCGGAATTACGAATCCAGGCGATTTTGCTGCTATCAGTAGCTTACATACCGCACTGGGACTCCCCAGTCTTCCTGGATGGGGCACTGGGCAAGACCCATGTGGAGATGCATGGCAGGGTGTTGTATGTAATGATTCAAACATCATTAAAATAGTTGTTAATGCTGCCAATTTGGGAGGTGAACTGGGTGACAACTTGGGAATGTTTTCTTCGATCCAAACAATTGATTTAAGCAACAATCATATAGGGGGAAGTATTCCATCCAGTTTGCCCGTTACCATGCAGAACCTTTTTCTTTCAGCTAATGAGTTCACTGGAAGCATTCCGAGTTCATTATCATCTTTGATTCAACTGACAGCCATGTCGTTGAATGATAACAAATTAAGTGGAGAAATACCAGATTCCTTTCAATCCGTTACACAATTGGTCAATTTGGATTTATCCAATAACAACTTGAGTGGGCCACTGCCTCCATCTATAAGCAATTTATTGGCATTGACCACCCTGCATTTGCAGAATAATCAGCTATCAGGGACCCTTGATGCTCTACAAGACCTTCCACTAAAAGACTTGAACATAGAGAACAATCTTTTTTCTGGACCCATACCTGAGAAGTTGCTGGCTATCCCTAATTTTAGAAAGGATGGAAACCCATTTAATTCTTCTGTTTCTCCTCCTCCTCCTCCTTCTGTATCTCCACCATCAAAGCCAGCACCAGCACCACCCATTTCTGGAGCTGGAGCACCACCAGTTTCTGGAGCACCACCATCTTCTCAACAGAAACCTAAGAAACAGGCTGATGGACCATCCGCATCTGAGGAATCCAGTACTGGAAGAAATAAGAAAAGCACTAAAAGGGTTGTGTTGATAACACTTGCAGTGGTTTTGTCATTCATAATTTTGGTTTTGGCATGTGTGCTTTTTATGCCAAGGTGCAGAAGGAGAACAGTTGATAGTATTTCCAAGCGACATCATCAGATAGGTGCTTATAGGGGTGAGAGAGAGAATGCTGGAAATGAAGGATCCATACCCCATACAACTGATCAGATACCTAAAGTTCCAAAAGAGGCCGTTGTGAGGTCGAAGCAGGAAACTCAAACAGAGGCTCAGAAGGTTCCAAAAACTCATGAAGAGAGAGAGAGAAACGTGTCAAGAATGAGCGCTATTCCAAAGAAGGATCATCATGAAGTAGATATGAGCGCACTCGATGTCTATCTAATGCCTCCCCCTCCCCCACCACCTCCCCCACCCCCTCCCCCTCCACCACCTCCTGTTGAAGAGGTCACTGCCGTGCCCATTGTTCCACCCGAAGTTCCTCCCTTGAAGCCTCCCACCAAACATAGAATTACCTCAACTTTTGCAAAATCTTTCACCATTGCGTCCCTTCAGCAATATACAAACAGCTTTTCGCAAGAAAATATTCTAGGAGAAGGAATGCTGGGGAGTGTTTATAGGGCACAGCTTCCCAGTGGGAAGCTACTGGCGGTCAAGAAACTGGATAAAAGAGCATTCAGTCAGCAAAAGGACGATGAATTTCTTGAGCTAGTGAATAATATCGATAGAATCCGGCATGCTAATGTGGTTGAGCTCAGTGGTTACTGTGCAGAGCATGGTGAAAGGCTTCTTATCTATGAGTATTGCAGTAGTGGATCATTGCAGGATGCACTGCACTTAGACGAAGAGTTCAGAAAGAAACTTTCTTGGAATGCCCGCATTAGAATGGCTCTTGGGGCTGCAAGAGCCTTGGAGTATCTGCATGAGGTCTGTCAGCCACCTGTTATTCATAGGAATTTCAAGTCTGCAAATGTCCTACTTGATGATGATTTTTCAGTGCGTGTTTCAGATTGTGGTCTGGCTCCATTAATATCAAAAGGAGCTGTTAGTCAGCTATCAGGTCAGCTTCTAACAGCATATGGTTACGGAGCGCCAGAATTCGAATCGGGAGTTTATACACTTGAGAGTGACGTTTACAGCTTCGGTGTGGTTATGCTGGAACTTCTAACTGGCCGGATGTCTTATGACAAAACAAGGACCCGAGGTGAGCAATTTTTAGTCAGATGGGCAATTCCACAGCTTCACGACATAGAGGCATTGACAAGCATGGTCGATCCTTCACTGAATGGTCGATACCCTGCCAAATCCTTGTCGTACTTTGCCGATATCATATCAAAATGTGTTCAGTCGGAGCCTGAATTCCGGCCACCAATGTCAACCGTTGTTCAGGACTTGCTCAACATGATAAGGAGAGAACCACATGGCAGTGGTTCAAGTGAAGGTTGA 2370 44.68 MGWKRSSRNDNLRIWVQVFVGFVICAAQVLFGITNPGDFAAISSLHTALGLPSLPGWGTGQDPCGDAWQGVVCNDSNIIKIVVNAANLGGELGDNLGMFSSIQTIDLSNNHIGGSIPSSLPVTMQNLFLSANEFTGSIPSSLSSLIQLTAMSLNDNKLSGEIPDSFQSVTQLVNLDLSNNNLSGPLPPSISNLLALTTLHLQNNQLSGTLDALQDLPLKDLNIENNLFSGPIPEKLLAIPNFRKDGNPFNSSVSPPPPPSVSPPSKPAPAPPISGAGAPPVSGAPPSSQQKPKKQADGPSASEESSTGRNKKSTKRVVLITLAVVLSFIILVLACVLFMPRCRRRTVDSISKRHHQIGAYRGERENAGNEGSIPHTTDQIPKVPKEAVVRSKQETQTEAQKVPKTHEERERNVSRMSAIPKKDHHEVDMSALDVYLMPPPPPPPPPPPPPPPPPVEEVTAVPIVPPEVPPLKPPTKHRITSTFAKSFTIASLQQYTNSFSQENILGEGMLGSVYRAQLPSGKLLAVKKLDKRAFSQQKDDEFLELVNNIDRIRHANVVELSGYCAEHGERLLIYEYCSSGSLQDALHLDEEFRKKLSWNARIRMALGAARALEYLHEVCQPPVIHRNFKSANVLLDDDFSVRVSDCGLAPLISKGAVSQLSGQLLTAYGYGAPEFESGVYTLESDVYSFGVVMLELLTGRMSYDKTRTRGEQFLVRWAIPQLHDIEALTSMVDPSLNGRYPAKSLSYFADIISKCVQSEPEFRPPMSTVVQDLLNMIRREPHGSGSSEG 789
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2140398 2148760 + Tan0006063.3 Tan02g0248 742874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0248 789 MobiDBLite consensus disorder prediction 251 279 - -
Tan02g0248 789 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 577 786 - -
Tan02g0248 789 SUPERFAMILY Protein kinase-like (PK-like) 474 773 IPR011009 -
Tan02g0248 789 SUPERFAMILY L domain-like 50 241 - -
Tan02g0248 789 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 35 260 - -
Tan02g0248 789 MobiDBLite consensus disorder prediction 283 307 - -
Tan02g0248 789 Pfam Leucine Rich Repeat 148 168 IPR001611 GO:0005515(InterPro)
Tan02g0248 789 Pfam Leucine Rich Repeat 172 193 IPR001611 GO:0005515(InterPro)
Tan02g0248 789 Pfam Leucine Rich Repeat 125 145 IPR001611 GO:0005515(InterPro)
Tan02g0248 789 Pfam Leucine Rich Repeat 101 120 IPR001611 GO:0005515(InterPro)
Tan02g0248 789 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 470 576 - -
Tan02g0248 789 MobiDBLite consensus disorder prediction 247 312 - -
Tan02g0248 789 Pfam Protein tyrosine and serine/threonine kinase 501 773 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan02g0248 789 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 38 778 IPR046959 -
Tan02g0248 789 ProSiteProfiles Protein kinase domain profile. 499 777 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g0248 789 MobiDBLite consensus disorder prediction 388 413 - -
Tan02g0248 789 SUPERFAMILY Formin homology 2 domain (FH2 domain) 443 449 - -
Tan02g0248 789 Gene3D Ribonuclease Inhibitor 40 256 IPR032675 -
Tan02g0248 789 Gene3D Phosphorylase Kinase; domain 1 472 576 - -
Tan02g0248 789 Gene3D Transferase(Phosphotransferase) domain 1 578 784 - -
Tan02g0248 789 MobiDBLite consensus disorder prediction 437 457 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0246 Tan-Chr2:2140398 Tan02g0248 Tan-Chr2:2140398 0.00E+00 dispersed
Tan02g0248 Tan-Chr2:2140398 Tan03g2439 Tan-Chr3:77945359 4.80E-156 dispersed
Tan02g0247 Tan-Chr2:2140398 Tan02g0248 Tan-Chr2:2140398 0.00E+00 tandem
Tan02g0248 Tan-Chr2:2140398 Tan02g0249 Tan-Chr2:2140398 0.00E+00 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67181 PF07714 PK_Tyr_Ser-Thr 4.70E-42 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0248 - - - 0.0