Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan02g0248 | ATGGGTTGGAAGAGATCTTCGAGGAATGACAATTTGAGGATCTGGGTTCAGGTTTTTGTCGGATTCGTGATCTGCGCAGCACAAGTTCTTTTCGGAATTACGAATCCAGGCGATTTTGCTGCTATCAGTAGCTTACATACCGCACTGGGACTCCCCAGTCTTCCTGGATGGGGCACTGGGCAAGACCCATGTGGAGATGCATGGCAGGGTGTTGTATGTAATGATTCAAACATCATTAAAATAGTTGTTAATGCTGCCAATTTGGGAGGTGAACTGGGTGACAACTTGGGAATGTTTTCTTCGATCCAAACAATTGATTTAAGCAACAATCATATAGGGGGAAGTATTCCATCCAGTTTGCCCGTTACCATGCAGAACCTTTTTCTTTCAGCTAATGAGTTCACTGGAAGCATTCCGAGTTCATTATCATCTTTGATTCAACTGACAGCCATGTCGTTGAATGATAACAAATTAAGTGGAGAAATACCAGATTCCTTTCAATCCGTTACACAATTGGTCAATTTGGATTTATCCAATAACAACTTGAGTGGGCCACTGCCTCCATCTATAAGCAATTTATTGGCATTGACCACCCTGCATTTGCAGAATAATCAGCTATCAGGGACCCTTGATGCTCTACAAGACCTTCCACTAAAAGACTTGAACATAGAGAACAATCTTTTTTCTGGACCCATACCTGAGAAGTTGCTGGCTATCCCTAATTTTAGAAAGGATGGAAACCCATTTAATTCTTCTGTTTCTCCTCCTCCTCCTCCTTCTGTATCTCCACCATCAAAGCCAGCACCAGCACCACCCATTTCTGGAGCTGGAGCACCACCAGTTTCTGGAGCACCACCATCTTCTCAACAGAAACCTAAGAAACAGGCTGATGGACCATCCGCATCTGAGGAATCCAGTACTGGAAGAAATAAGAAAAGCACTAAAAGGGTTGTGTTGATAACACTTGCAGTGGTTTTGTCATTCATAATTTTGGTTTTGGCATGTGTGCTTTTTATGCCAAGGTGCAGAAGGAGAACAGTTGATAGTATTTCCAAGCGACATCATCAGATAGGTGCTTATAGGGGTGAGAGAGAGAATGCTGGAAATGAAGGATCCATACCCCATACAACTGATCAGATACCTAAAGTTCCAAAAGAGGCCGTTGTGAGGTCGAAGCAGGAAACTCAAACAGAGGCTCAGAAGGTTCCAAAAACTCATGAAGAGAGAGAGAGAAACGTGTCAAGAATGAGCGCTATTCCAAAGAAGGATCATCATGAAGTAGATATGAGCGCACTCGATGTCTATCTAATGCCTCCCCCTCCCCCACCACCTCCCCCACCCCCTCCCCCTCCACCACCTCCTGTTGAAGAGGTCACTGCCGTGCCCATTGTTCCACCCGAAGTTCCTCCCTTGAAGCCTCCCACCAAACATAGAATTACCTCAACTTTTGCAAAATCTTTCACCATTGCGTCCCTTCAGCAATATACAAACAGCTTTTCGCAAGAAAATATTCTAGGAGAAGGAATGCTGGGGAGTGTTTATAGGGCACAGCTTCCCAGTGGGAAGCTACTGGCGGTCAAGAAACTGGATAAAAGAGCATTCAGTCAGCAAAAGGACGATGAATTTCTTGAGCTAGTGAATAATATCGATAGAATCCGGCATGCTAATGTGGTTGAGCTCAGTGGTTACTGTGCAGAGCATGGTGAAAGGCTTCTTATCTATGAGTATTGCAGTAGTGGATCATTGCAGGATGCACTGCACTTAGACGAAGAGTTCAGAAAGAAACTTTCTTGGAATGCCCGCATTAGAATGGCTCTTGGGGCTGCAAGAGCCTTGGAGTATCTGCATGAGGTCTGTCAGCCACCTGTTATTCATAGGAATTTCAAGTCTGCAAATGTCCTACTTGATGATGATTTTTCAGTGCGTGTTTCAGATTGTGGTCTGGCTCCATTAATATCAAAAGGAGCTGTTAGTCAGCTATCAGGTCAGCTTCTAACAGCATATGGTTACGGAGCGCCAGAATTCGAATCGGGAGTTTATACACTTGAGAGTGACGTTTACAGCTTCGGTGTGGTTATGCTGGAACTTCTAACTGGCCGGATGTCTTATGACAAAACAAGGACCCGAGGTGAGCAATTTTTAGTCAGATGGGCAATTCCACAGCTTCACGACATAGAGGCATTGACAAGCATGGTCGATCCTTCACTGAATGGTCGATACCCTGCCAAATCCTTGTCGTACTTTGCCGATATCATATCAAAATGTGTTCAGTCGGAGCCTGAATTCCGGCCACCAATGTCAACCGTTGTTCAGGACTTGCTCAACATGATAAGGAGAGAACCACATGGCAGTGGTTCAAGTGAAGGTTGA | 2370 | 44.68 | MGWKRSSRNDNLRIWVQVFVGFVICAAQVLFGITNPGDFAAISSLHTALGLPSLPGWGTGQDPCGDAWQGVVCNDSNIIKIVVNAANLGGELGDNLGMFSSIQTIDLSNNHIGGSIPSSLPVTMQNLFLSANEFTGSIPSSLSSLIQLTAMSLNDNKLSGEIPDSFQSVTQLVNLDLSNNNLSGPLPPSISNLLALTTLHLQNNQLSGTLDALQDLPLKDLNIENNLFSGPIPEKLLAIPNFRKDGNPFNSSVSPPPPPSVSPPSKPAPAPPISGAGAPPVSGAPPSSQQKPKKQADGPSASEESSTGRNKKSTKRVVLITLAVVLSFIILVLACVLFMPRCRRRTVDSISKRHHQIGAYRGERENAGNEGSIPHTTDQIPKVPKEAVVRSKQETQTEAQKVPKTHEERERNVSRMSAIPKKDHHEVDMSALDVYLMPPPPPPPPPPPPPPPPPVEEVTAVPIVPPEVPPLKPPTKHRITSTFAKSFTIASLQQYTNSFSQENILGEGMLGSVYRAQLPSGKLLAVKKLDKRAFSQQKDDEFLELVNNIDRIRHANVVELSGYCAEHGERLLIYEYCSSGSLQDALHLDEEFRKKLSWNARIRMALGAARALEYLHEVCQPPVIHRNFKSANVLLDDDFSVRVSDCGLAPLISKGAVSQLSGQLLTAYGYGAPEFESGVYTLESDVYSFGVVMLELLTGRMSYDKTRTRGEQFLVRWAIPQLHDIEALTSMVDPSLNGRYPAKSLSYFADIISKCVQSEPEFRPPMSTVVQDLLNMIRREPHGSGSSEG | 789 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 2140398 | 2148760 | + | Tan0006063.3 | Tan02g0248 | 742874 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan02g0248 | 789 | MobiDBLite | consensus disorder prediction | 251 | 279 | - | - | |
Tan02g0248 | 789 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 8 | 577 | 786 | - | - | |
Tan02g0248 | 789 | SUPERFAMILY | Protein kinase-like (PK-like) | 474 | 773 | IPR011009 | - | |
Tan02g0248 | 789 | SUPERFAMILY | L domain-like | 50 | 241 | - | - | |
Tan02g0248 | 789 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 3 | 35 | 260 | - | - | |
Tan02g0248 | 789 | MobiDBLite | consensus disorder prediction | 283 | 307 | - | - | |
Tan02g0248 | 789 | Pfam | Leucine Rich Repeat | 148 | 168 | IPR001611 | GO:0005515(InterPro) | |
Tan02g0248 | 789 | Pfam | Leucine Rich Repeat | 172 | 193 | IPR001611 | GO:0005515(InterPro) | |
Tan02g0248 | 789 | Pfam | Leucine Rich Repeat | 125 | 145 | IPR001611 | GO:0005515(InterPro) | |
Tan02g0248 | 789 | Pfam | Leucine Rich Repeat | 101 | 120 | IPR001611 | GO:0005515(InterPro) | |
Tan02g0248 | 789 | FunFam | Protein STRUBBELIG-RECEPTOR FAMILY 8 | 470 | 576 | - | - | |
Tan02g0248 | 789 | MobiDBLite | consensus disorder prediction | 247 | 312 | - | - | |
Tan02g0248 | 789 | Pfam | Protein tyrosine and serine/threonine kinase | 501 | 773 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan02g0248 | 789 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 | 38 | 778 | IPR046959 | - | |
Tan02g0248 | 789 | ProSiteProfiles | Protein kinase domain profile. | 499 | 777 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan02g0248 | 789 | MobiDBLite | consensus disorder prediction | 388 | 413 | - | - | |
Tan02g0248 | 789 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 443 | 449 | - | - | |
Tan02g0248 | 789 | Gene3D | Ribonuclease Inhibitor | 40 | 256 | IPR032675 | - | |
Tan02g0248 | 789 | Gene3D | Phosphorylase Kinase; domain 1 | 472 | 576 | - | - | |
Tan02g0248 | 789 | Gene3D | Transferase(Phosphotransferase) domain 1 | 578 | 784 | - | - | |
Tan02g0248 | 789 | MobiDBLite | consensus disorder prediction | 437 | 457 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan02g0246 | Tan-Chr2:2140398 | Tan02g0248 | Tan-Chr2:2140398 | 0.00E+00 | dispersed | |
Tan02g0248 | Tan-Chr2:2140398 | Tan03g2439 | Tan-Chr3:77945359 | 4.80E-156 | dispersed | |
Tan02g0247 | Tan-Chr2:2140398 | Tan02g0248 | Tan-Chr2:2140398 | 0.00E+00 | tandem | |
Tan02g0248 | Tan-Chr2:2140398 | Tan02g0249 | Tan-Chr2:2140398 | 0.00E+00 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
67181 | PF07714 | PK_Tyr_Ser-Thr | 4.70E-42 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan02g0248 | - | - | - | 0.0 |