Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0283 ATGGATAATGGAAATCTGGTTTTGAGTTATGAAGATCAAGAAGACTTGCCTCAGCAAATCCTCTGGCAGAGTTTTGATTACCCAACTGATACATTTCTTCCTGGCATGGTAATGGACGACAACTTAGTTCTGACTTCATGGAAGAGCTATAATGACCCGGCTCAAGGGAACTTCACTTTTCAGCTAGATCAAGACGGAGGCCAATATGTCATTTGGAAGAGATCAGTTAAATACTGGAAAAGTGGAGTTTCAGGTAAGTTTATCACCACTGATAAGATGCCTGCTGCATTGCTATACCTTCTGTCAAATTTCTCATCAAAAGCTGTCCCAAACTTCTCCGTGCCACATCTCACATCATCATTGTATATTGATACAAGGCTAGTATTGAACAGCTCAGGTCAGCTTCAATATCTAAACTGGGAGGATCACAAAGTATGGTCTCAGATTTGGGTGGAGCCAAGAGATAGGTGCAGTGTATATAATGCGTGCGGAGATTTTGCTAGCTGTAATAGTAAGGGTGGTATGGCTTGCAAATGCCTGCCTGGTTTTGAGCCTACCTCTCCGGATAGTTGGAATGTTGGAGATTATTCGGGTGGATGCATCCGGAAGTCACCAATATGCAGTGTCAACAATGACAATGATGTGTTTTTGAGCCTAAAGATGATGAAAACTGGAAACCCAGACTTCCAATTTAATGCAAAGGATGACTTTGATTGCAAATTGGAGTGCCTTAACAACTGTCAGTGTCAGGCTTACTCATATGTGGAAGCTAATATCACAAGGCAGGGACGGATTGATAATTCTGCTTGTTGGATTTGGTCCGGAGATCTCAATAATCTTCAGGATGAGTTTGATAATGGTCGTGACCTCAATGTGCGAGTAGCAGTTCGAGATCTAGAATCGACAGTCAGAAATTGTGGAACATGTGGCACAAACCTCATTCCTTATCCGCTTAGCACAGGACCTAAATGCGGTGACCCCATGTACTTCAATTTTAACTGCAATGTGGCTACTGGCCAGGTAAGCTTTGAAGCAGCAGGTGGAACGTACAAGGTTAAATTCATTGATTCAGAAGCTCGGAAATTTATCATTCAAACCCAGGAAGCTGGTGATTGTGGTGATAAAAATTGGATAAACAAAACCCTTCAGCTGAATCAGTCATCTCCTTTCCGTGTAACCAGCTGGTGCAACTTTAAGGAGACCAACCCAGAGAATTTTTCTCCGGGAACCAGCAATGAAGTTGAAATTGGTTGGGATCCACCAATAGAGCCAACTTGTTCTTCAACTATGGACTGCAAAGACTGGCCTTATTCAACCTGCAACATGAGTAAAGATGGAAACAAAAGATGCCTTTGCATAGCAAACTTCCATTGGAATGGCCGGAGCTTGAATTGCACTACAGATCACAACAAAGAAAAGGATGGAAGAGGCAAGACGACCATCTCTGTGATTATCGTTGCAACAACCATATGTGTAGTCTTTCTGATGATTCTCTCATGTACCGTGTTTTATATTTACTTCTCCAAAACTGGACTCATTGATAGACAAGAAAGCAGGGGAAACAGCCAAAAAGACTTAATGCTGCACTTGTATGACAACGAGAGACGTGTCAAAGGCCTCATCGAGTCAGGTCGATTCAAGGAAGATGACACGAATGGAATAGACATTCCATTTTTTGATTTGGAAACAATTCTAATTGCAACAGAGAACTTCTCGAATGCAAATAAGCTTGGACAGGGAGGTTTTGGGCCAGTTTACAAGGGCATGTTTCCTAGTGGGCAGGAGATTGCTGTAAAGAGGCTCTCAAGTGGTTCAGGGCAAGGCTTTGAGGAGTTTAAGAATGAGGTTTTGTTAATCGCGAAACTTCAGCATCGAAATCTTGTAAGACTTTTGGGCTACTGTGTTGAAGGAGATGAAAAGATGTTGCTTTATGAATATATGCCAAACAAAAGCTTAGACGCCTTTATATTCGATCAAAAGCTGAGTGTAGCATTGGATTGGGACATGCGCTTCAACGTCATCTTAGGAATCGCTCGCGGCCTACTTTACCTACACCAAGATTCAAGGTTGAGAATCATTCATAGAGATTTGAAGACAAGTAACATTCTTCTAGATGAGGAGATGAATCCCAAAATATCTGACTTTGGCTTGGCGAGGATATTTGGAGGAAAAGAAACTGCCACAAATACCAGAAGGGTGGTAGGGACTTATGGATACATGTCACCGGAATATGCGTTGGACGGCATATTTTCTGTCAAATCTGATGTCTTTAGCTTCGGTGTAGTCGTAATCGAGATCATTAGTGGAAAAAGGAACACAGGATTCTATCACTCGGAGAAAGCTTTGAGTCTTCTAGGCTATGCCTGGGATTTGTGGATGAAAGACGAAGGCTTGGTTTTAATGGAGCAAACACTGAGTCAGAATTGCAAAAGAGATGAGTATTTGAAGTGTTTGAATGTGGGGCTGTTGTGCGTGCAGGAAGATCCATGGGATCGACCAACCATGTCGAATGTGGTCTTCATGCTCGGCAGTGAAACTGCAACTCTCCCGTCTCCGAAACCACCAGCATTCGTCGTGCGGCGGTGCCCTTCGAGCAGAGCTTCTTCTTCCACTAAACCAGAAACCTTCTCCCATAATGAGTTGACAGTCACCTTAAAAGAAGGTAGATAG 2670 42.77 MDNGNLVLSYEDQEDLPQQILWQSFDYPTDTFLPGMVMDDNLVLTSWKSYNDPAQGNFTFQLDQDGGQYVIWKRSVKYWKSGVSGKFITTDKMPAALLYLLSNFSSKAVPNFSVPHLTSSLYIDTRLVLNSSGQLQYLNWEDHKVWSQIWVEPRDRCSVYNACGDFASCNSKGGMACKCLPGFEPTSPDSWNVGDYSGGCIRKSPICSVNNDNDVFLSLKMMKTGNPDFQFNAKDDFDCKLECLNNCQCQAYSYVEANITRQGRIDNSACWIWSGDLNNLQDEFDNGRDLNVRVAVRDLESTVRNCGTCGTNLIPYPLSTGPKCGDPMYFNFNCNVATGQVSFEAAGGTYKVKFIDSEARKFIIQTQEAGDCGDKNWINKTLQLNQSSPFRVTSWCNFKETNPENFSPGTSNEVEIGWDPPIEPTCSSTMDCKDWPYSTCNMSKDGNKRCLCIANFHWNGRSLNCTTDHNKEKDGRGKTTISVIIVATTICVVFLMILSCTVFYIYFSKTGLIDRQESRGNSQKDLMLHLYDNERRVKGLIESGRFKEDDTNGIDIPFFDLETILIATENFSNANKLGQGGFGPVYKGMFPSGQEIAVKRLSSGSGQGFEEFKNEVLLIAKLQHRNLVRLLGYCVEGDEKMLLYEYMPNKSLDAFIFDQKLSVALDWDMRFNVILGIARGLLYLHQDSRLRIIHRDLKTSNILLDEEMNPKISDFGLARIFGGKETATNTRRVVGTYGYMSPEYALDGIFSVKSDVFSFGVVVIEIISGKRNTGFYHSEKALSLLGYAWDLWMKDEGLVLMEQTLSQNCKRDEYLKCLNVGLLCVQEDPWDRPTMSNVVFMLGSETATLPSPKPPAFVVRRCPSSRASSSTKPETFSHNELTVTLKEGR 889
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2432606 2437432 + Tan0007493.1 Tan02g0283 742909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0283 889 Pfam D-mannose binding lectin 1 45 IPR001480 -
Tan02g0283 889 MobiDBLite consensus disorder prediction 865 889 - -
Tan02g0283 889 ProSiteProfiles Protein kinase domain profile. 571 849 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g0283 889 SMART ntp_6 211 294 IPR003609 -
Tan02g0283 889 Pfam PAN-like domain 207 279 IPR003609 -
Tan02g0283 889 CDD STKc_IRAK 577 842 - -
Tan02g0283 889 Pfam S-locus glycoprotein domain 79 186 IPR000858 GO:0048544(InterPro)
Tan02g0283 889 Pfam Domain of unknown function (DUF3403) 844 889 IPR021820 GO:0004674(InterPro)
Tan02g0283 889 ProSitePatterns Serine/Threonine protein kinases active-site signature. 692 704 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan02g0283 889 Gene3D Phosphorylase Kinase; domain 1 540 646 - -
Tan02g0283 889 Pfam Protein tyrosine and serine/threonine kinase 574 839 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan02g0283 889 SUPERFAMILY alpha-D-mannose-specific plant lectins 2 53 IPR036426 -
Tan02g0283 889 ProSiteProfiles PAN/Apple domain profile. 207 295 IPR003609 -
Tan02g0283 889 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 536 646 - -
Tan02g0283 889 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 647 850 - -
Tan02g0283 889 CDD PAN_AP_plant 207 295 - -
Tan02g0283 889 SUPERFAMILY Protein kinase-like (PK-like) 556 875 IPR011009 -
Tan02g0283 889 MobiDBLite consensus disorder prediction 865 882 - -
Tan02g0283 889 Gene3D Transferase(Phosphotransferase) domain 1 647 849 - -
Tan02g0283 889 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 21 858 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Tan02g0283 889 SMART serkin_6 571 815 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g0283 889 PIRSF SRK 348 472 IPR024171 GO:0004674(InterPro)
Tan02g0283 889 PIRSF SRK 426 889 IPR024171 GO:0004674(InterPro)
Tan02g0283 889 PIRSF SRK 1 315 IPR024171 GO:0004674(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0283 Tan-Chr2:2432606 Tan02g0285 Tan-Chr2:2433503 0.00E+00 dispersed
Tan02g0283 Tan-Chr2:2432606 Tan02g0284 Tan-Chr2:2433503 0.00E+00 tandem
Tan05g2264 Tan-Chr5:73544255 Tan02g0283 Tan-Chr2:2432606 5.10E-98 transposed
Tan02g0283 Tan-Chr2:2432606 Tan05g0833 Tan-Chr5:6404285 9.00E-244 wgd
Tan02g0283 Tan-Chr2:2432606 Tan05g3187 Tan-Chr5:83916792 8.50E-117 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67183 PF07714 PK_Tyr_Ser-Thr 1.60E-45 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0283 - - - 0.0