Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0320 ATGGAGCTCTTTCGTTGTGTTGTCTTTCTAATTGTATGTCTTTTGGGATTTGGTAGCTCAAGCCAAGCTCACCTTGAGCTTGGCTACTATGCAAAGAGCTGCCCTCGCGCCGAGAAAATCGTCTTCGATTTTGTCTACAAGAACATTCCCAAGGTTCCGACCTTGGCTGCTGCCTTCATTAGAATGCACTTCCACGATTGCTTTGTTCGGGGTTGCGACGCATCTGTACTTCTAAACTCGACTACTAACAACCAAAGCGAGAAGGTATCTCCACCAAATCTAACATTAAGAGGCTTCGACTTTCTTGATAAAATTAAGAAACTTTTGGAAGCCGAGTGCCCTGGAATTGTCTCCTGCGCCGACATTCTTTCTCTAGTTGCAAGAGACTCCGTCGTTGCCATTGGCGGCCCATTTTGGAGGGTTCCAACCGGAAGAAGAGACGGTGTGATCTCAAGATCCTCAGAAGCCTTGGCCAATATTCCTCCGCCGTTTGCCAATTTGTCAACTCTCCAACGACAATTCGCCAACCAGGGCCTTGATCTCAAAGACTTGGTTTTGCTGTCCGGAGCTCACACAATCGGAATATCCCATTGCTCATCATTCACAAGGCGATTGTACAACTTCACGGGGGTGGGAGACCAAGACCCATCGCTAGACAGCGAGTACGCGGCAAATCTAAAGGCAAAGAAATGCAAAAGCATAACCGCAAACGGGATCGTGGAAATGGACCCTGGCAGTTTCCGAACCTTCGATCTCAGCTACTACTCGCTTCTTTTGAAGCGACGCGGGCTGTTCCAGTCCGACGCGGCTCTGACCACGAGCCCGACCACCAAGGCCTTCGTCACCGACCTGCTCAATGGCTCGGTTAAGAATTTCTTTGCTGAGTTTGGGTTGGCCATGGAGAAGATGGGTCGGATCGGGGTCAAGACGGGCGCCGAGGGTCAGATTCGCAAGCATTGTGCTTTTGTCAATGCTTGA 978 50.0 MELFRCVVFLIVCLLGFGSSSQAHLELGYYAKSCPRAEKIVFDFVYKNIPKVPTLAAAFIRMHFHDCFVRGCDASVLLNSTTNNQSEKVSPPNLTLRGFDFLDKIKKLLEAECPGIVSCADILSLVARDSVVAIGGPFWRVPTGRRDGVISRSSEALANIPPPFANLSTLQRQFANQGLDLKDLVLLSGAHTIGISHCSSFTRRLYNFTGVGDQDPSLDSEYAANLKAKKCKSITANGIVEMDPGSFRTFDLSYYSLLLKRRGLFQSDAALTTSPTTKAFVTDLLNGSVKNFFAEFGLAMEKMGRIGVKTGAEGQIRKHCAFVNA 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2632345 2635452 - Tan0004544.1 Tan02g0320 742946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0320 325 Gene3D Peroxidase, domain 2 161 303 - -
Tan02g0320 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Tan02g0320 325 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g0320 325 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g0320 325 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g0320 325 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g0320 325 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g0320 325 FunFam Peroxidase 28 171 - -
Tan02g0320 325 CDD secretory_peroxidase 24 323 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Tan02g0320 325 Pfam Peroxidase 43 284 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g0320 325 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601(InterPro)
Tan02g0320 325 ProSiteProfiles Plant heme peroxidase family profile. 24 324 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g0320 325 PANTHER PEROXIDASE 25-RELATED 14 320 IPR000823 GO:0004601(InterPro)|GO:0004601(PANTHER)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Tan02g0320 325 FunFam Peroxidase 161 303 - -
Tan02g0320 325 SUPERFAMILY Heme-dependent peroxidases 25 324 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g0320 325 Gene3D - 29 324 - -
Tan02g0320 325 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g0320 325 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g0320 325 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g0320 325 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g0320 325 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g0320 325 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g0320 325 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g0320 325 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g0320 325 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0320 Tan-Chr2:2632345 Tan06g2612 Tan-Chr6:78687832 2.50E-74 dispersed
Tan02g0320 Tan-Chr2:2632345 Tan02g0321 Tan-Chr2:2652912 6.30E-102 tandem
Tan02g0320 Tan-Chr2:2632345 Tan05g0860 Tan-Chr5:6743085 9.60E-135 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0320 K00430 - csv:101213629 478.789