Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0321 ATGGCCATTAGTCCCAAGCTTTTCTCCCTGCTCTTTCTGCAACTAATGCTCGTATCGTCTCTCTCGAATGTCGCCGAAGCGCAAGGCCTGGTGGTCGGGTTTTATCAGTACAGCTGCCCGGGGTTGGAGTACATCGTTGCCAAAACTGTGGCTTCGTATATTATGAAACAACCTACTATAGCAGCTTCGTTATTAAGGATGCACTTCCATGACTGCTTTGTTCGGGGCTGTGACGGTTCTGTGCTGTTAAATTCGACGCCAGACAACCAAGCCGAGAAAGATTCCATTCCCAACCTTAGTTTAAGAGGTTTCAACGTCGTTGACGCCGTTAAAGCTGCCGTCGAAAAGCGGTGTCCCGGCGTCGTTTCATGTGCTGATGTCCTCGCTTTGATAGCTCGCGACGCCGTTAGATTGATTGGAGGCCCACTGTGGGAAGTTCCAACAGGAAGAAGAGATGGAACAGTTTCAATCTCCAGAGAAGCATTGATCAATTTGCCTCCTCCATTCGCCAACATTTCATCTCTTAAAACCAGTTTCCTCTCCCTAGGTCTCTCCGTCAAAGATCTAGTCGTTTTATCCGGTTCTCACACTATCGGAGTCTCTCACTGCAACTCCTTCTCCAACCGTCTCTACAATTTCACCGGCAAAGGCGACGCCGATCCGAAACTCGACAAATACTACGCCGTCGCATTGAAGAATAAATGCAAGCCAAACGACCAGAAAACGATCGTCGAGATGGATCCAGGAAGCTTCAAGACCTTCGATGAAGGTTACTACACTCTCGTCTCCAAGAGAAGAGGATTGTTTCAGTCTGATTCCGCTCTTCTCGACGATCCTGATACCAAAGCCTACGTTCTGTTTCAGGCCAAAACACGCGGCGCTACTTTTGCCGCCGATTTCGCTGAATCGATGGTCAATATGGGACAAATCGGCGTCCTCACCGGCACCGACGGCGAAATTAGGCGCCGATGTGCTTTTGTTAACTGA 987 49.24 MAISPKLFSLLFLQLMLVSSLSNVAEAQGLVVGFYQYSCPGLEYIVAKTVASYIMKQPTIAASLLRMHFHDCFVRGCDGSVLLNSTPDNQAEKDSIPNLSLRGFNVVDAVKAAVEKRCPGVVSCADVLALIARDAVRLIGGPLWEVPTGRRDGTVSISREALINLPPPFANISSLKTSFLSLGLSVKDLVVLSGSHTIGVSHCNSFSNRLYNFTGKGDADPKLDKYYAVALKNKCKPNDQKTIVEMDPGSFKTFDEGYYTLVSKRRGLFQSDSALLDDPDTKAYVLFQAKTRGATFAADFAESMVNMGQIGVLTGTDGEIRRRCAFVN 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2652912 2656039 - Tan0001053.1 Tan02g0321 742947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0321 328 FunFam Peroxidase 33 176 - -
Tan02g0321 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Tan02g0321 328 Gene3D - 33 328 - -
Tan02g0321 328 FunFam Peroxidase 166 307 - -
Tan02g0321 328 ProSiteProfiles Plant heme peroxidase family profile. 29 328 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g0321 328 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g0321 328 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g0321 328 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g0321 328 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g0321 328 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g0321 328 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g0321 328 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g0321 328 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g0321 328 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g0321 328 Pfam Peroxidase 46 286 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g0321 328 PANTHER PEROXIDASE 25-RELATED 31 324 IPR000823 GO:0004601(InterPro)|GO:0004601(PANTHER)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Tan02g0321 328 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601(InterPro)
Tan02g0321 328 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g0321 328 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g0321 328 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g0321 328 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g0321 328 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g0321 328 Gene3D Peroxidase, domain 2 166 307 - -
Tan02g0321 328 SUPERFAMILY Heme-dependent peroxidases 30 328 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g0321 328 CDD secretory_peroxidase 29 327 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0321 Tan-Chr2:2652912 Tan05g0860 Tan-Chr5:6743085 7.70E-100 dispersed
Tan02g0320 Tan-Chr2:2632345 Tan02g0321 Tan-Chr2:2652912 6.30E-102 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0321 K00430 - csv:101219177 557.755