Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan02g0324 | ATGTCTGAATTCAACGTGCAGATTCCATCTGCTTTTGACCCATTTGCTGATGCAAATGCTGAGGACTCAGGAGCTGGGGCAAAAGAGTATGTTCACGTGCGCATTCAGCAACGTAACGGGAGAAAAAGCCTGACAACTGTCCAAGGATTGAAGAAGGAATTTAGTTATAACAAGATACTCAAGGATCTGAAGAAGGAATTCTGCTGTAATGGCACAGTTGTGCAAGATCCTGAGCTAGGCCAGGTTATACAACTCCAGGGAGACCAAAGAAAGAATGTGTCTACCTTCCTTGTGCAGGCTGGCATTGTGAAGAAGGAGAACATCAAGATTCACGGTTTCTGA | 342 | 44.74 | MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIHGF | 113 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 2685955 | 2686876 | + | Tan0010453.1 | Tan02g0324 | 742950 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan02g0324 | 113 | NCBIfam | translation initiation factor SUI1 | 6 | 113 | IPR005874 | GO:0003743(InterPro) | |
Tan02g0324 | 113 | SUPERFAMILY | eIF1-like | 4 | 113 | IPR036877 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Tan02g0324 | 113 | CDD | eIF1_SUI1 | 29 | 112 | IPR005874 | GO:0003743(InterPro) | |
Tan02g0324 | 113 | FunFam | Eukaryotic translation initiation factor SUI1 | 2 | 113 | - | - | |
Tan02g0324 | 113 | PIRSF | Transl_init_SUI1_Euk | 1 | 113 | IPR005874 | GO:0003743(InterPro) | |
Tan02g0324 | 113 | ProSiteProfiles | Translation initiation factor SUI1 family profile. | 31 | 101 | IPR001950 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Tan02g0324 | 113 | Pfam | Translation initiation factor SUI1 | 28 | 102 | IPR001950 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Tan02g0324 | 113 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 | 1 | 113 | - | GO:0003723(PANTHER) | |
Tan02g0324 | 113 | Gene3D | - | 1 | 113 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g4554 | Tan-Chr1:111360078 | Tan02g0324 | Tan-Chr2:2685955 | 2.10E-44 | dispersed | |
Tan02g0324 | Tan-Chr2:2685955 | Tan02g0325 | Tan-Chr2:2689222 | 3.50E-60 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan02g0324 | K03113 | - | csv:101219651 | 228.409 |