Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0325 ATGTCTGAATTCAACGTGCAGATTCCATCTGCTTTTGACCCATTTGCTGATGCAAATGCTGAGGACTCAGGAGCTGGGGCAAAAGAGTATGTTCATGTGCGCATACAGCAACGTAACGGGAGAAAAAGTCTGACAACTGTCCAAGGATTAAAGAAGGAATTTAGTTATAACAAGATACTTAAGGATCTGAAGAAGGAATTTTGCTGTAATGGCACAGTTGTGCAAGATCCTGAGCTAGGCCAGGTTATACAACTTCAGGGAGACCAAAGAAAGAATGTGTCTACCTTCCTTGTGCAGGCTGGCATTGTGAAGAAGGAAAATATCAAGATTCACGGTTTCTAA 342 42.11 MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIHGF 113
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2689222 2692011 + Tan0004741.1 Tan02g0325 742951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0325 113 NCBIfam translation initiation factor SUI1 6 113 IPR005874 GO:0003743(InterPro)
Tan02g0325 113 SUPERFAMILY eIF1-like 4 113 IPR036877 GO:0003743(InterPro)|GO:0006413(InterPro)
Tan02g0325 113 CDD eIF1_SUI1 29 112 IPR005874 GO:0003743(InterPro)
Tan02g0325 113 FunFam Eukaryotic translation initiation factor SUI1 2 113 - -
Tan02g0325 113 PIRSF Transl_init_SUI1_Euk 1 113 IPR005874 GO:0003743(InterPro)
Tan02g0325 113 ProSiteProfiles Translation initiation factor SUI1 family profile. 31 101 IPR001950 GO:0003743(InterPro)|GO:0006413(InterPro)
Tan02g0325 113 Pfam Translation initiation factor SUI1 28 102 IPR001950 GO:0003743(InterPro)|GO:0006413(InterPro)
Tan02g0325 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 113 - GO:0003723(PANTHER)
Tan02g0325 113 Gene3D - 1 113 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0324 Tan-Chr2:2685955 Tan02g0325 Tan-Chr2:2689222 3.50E-60 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0325 K03113 - csv:101219651 228.409