Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0332 ATGGAGTCAAGATTAGAAACTTTGCAGTTATTTGAGAAAGAGATTGTGGCCGTCATCGGCCCACAATCCTCTGTGGCGGCTCATGTGATTTCTCAGATCGTTAATGGTCTACAAGTTCCTCAATTATCATACGGTGCCACTGATCCAACGTTGTCAACTCTTCAGCTCCCATTTTTCTTCCGAATCACTTTAAGCGACTCGTACCAAATGGCTGCCATGGCTGACTTGATTGATTATTATGGGTGGAAAGAGGTCATCGCTATATTTTTGGATGATGATTATGGGAGAAATGGGATATCTTCTTTGGGTGATGAACTTCACAAGAAGATGTGTCGTATTTCTCACGTTTTCGCCTTGCCTTCTCTGGTTAATCTTACTAAGATCACGGAGATACTTAATCATTCTAAATTGCTTGGTCCTCGTGTTTATGTGGTGCACGTAGGCCCTGATCCCCAATTAAGAATCTTCACCATCGCCCATAAACTTGGTATGCTTACCAGCAATTACGTTTGGTTTGCAACTGATTGGCTTGCCACAACTCTAGATTCTTTTTCACCAACAGATCGTGCTTCCCTTGATACACTTAATGGGGTAGTGGGGCTACGCCCACATACTCCAGAGTCTAAAGGAAAGAGGGATTTGTTGCATCGGTTGACCAATTCTGCGTTGAATGTTTATGGACTCTACGCTTATGATTCAGTATGGGTTGTTGCAAAGGCAGTCGATAAGTTTCTCAAAGAAAATGGTAATATAACCTTTTCATCCACAGGTAAAGTATTTGGCTCTAATGCAAGTGGAATTCAACTGGGAAGGCTTAAAGTGTTTGATGGCGGAAGTGATCTGCTTAAAGTTATTAAGCAAACAAATTACACTGGTTTAAGTGGGCGAATTCAGTTTGGTGAAGACAGAAATATTATGAACGGTAGCTACGATGTGATTAATATTGACCAAAAGGAAATTCGTACGGTGGGCTATTGGTCTAATTACTCGAGATTCTCTGTTTCACCACCAGAAGCTTTGACAGTGAAACAAGAGAATTTCTCCTTAGATCAGAAACTTGACAATGTAGTTTGGCCTGGTGGAAAATCAGAATTACCACGGGGTTGGGTGATTGCAGACGCTGGAAAACCCCTAAGAATTGCATTCCCGAAAAGAGCAAGCTTTGTTGATTTTGTTACTCAAGTGAATAACACCGATAGCGTTCAAGGATACGTTATTGATATTTTCAAAGCAGCACTCAAGCTTATTCCATATGATGTTCCTTACAAATTCGTGCCGTTTGGGGATGGTCAAATCAATCCCAGTTATGATGAACTTGTTCAGTCGGTTGCAAATAATGTGTTTGATGCAGCTGTTGGGGACATTGCCATTGTTACCAACCGTACAAAGATTGTTGATTTTTCTCAACCATATACAACTACTGGGCTTATCATAGTTGCCCCAGTTCAAAATTCAAAATCAAGTGCTTGGGTGTTTCTTAAACCATTTTCAGCGGAGATGTGGTGTGTGACAGCAGTTTCTTTTGTGATTATTGGGATTGTTATTTGGATGCTTGAACACCGAATCAACGACCATTTTCGAGGGCCTCCAAAGAGGCAGATTATCACAATGTGTCTGTTCAGCTTTTCCACTCTTTTCAAGGCAAATCAAGAAGCAACAATTAGCCCACTTTCACGACTGGTGATGTTGGTGTGGCTGTTCTTATTGTTGGTAATAACGTCAAGCTACACAGCAAGTTTGACATCAATACTAACAATTCAACAACTTTGGTCGCCAATACGTGGAATTGATGAGTTGGTTGCAAGTAATTTGCCGATTGGATATCAGGTAGGATCCTTTGCTTACGACTATCTGACACAGAGCCTTTTCATACCACGTTCCAGACTAGTGAAGCTGTACGACCCTGATGATTACGAGAGAGCACTGCGGCTCGGTCCCAACGGAGGCGGTGTGGCGGCTATCATTGATGAACTTCCATATTTGGAGTTTTTTCTCTCTAAGACCAAAGAATTTGGAATGATTGGGCAAACTTTTACCAGAAGCGGATGGGGATTTGCTTTTCAGCGAGGATCTCGACTTGCAGTTGATATGTCAACTGCACTTTTGAAACTTTCTGAGAGTGGAAAGCTTCAAGAGATACACGACACTTGGTTCTGTAAGCTTGGTTGTCCTGGGCAGCGGGGAGGAAAATCGGAGCCAGACCAACTTCAATTGATCAGTTTCTGGGGTTTGTATTTGCTTTGTGGAATCATTTCCCTCGCTGCACTTTTTGTGTTTCTTCTAAGACTAATTCACCAGTATATCCGCTATCAACGACATCATCGTCGTTCAGAGGTAGTCTCATCGTCCCCCGTTTCATCAAACATAGGCTGTACTCGGACCATTCAAAGCTTTATACGGTTTATTGATGAGAAGGAAGAAGCCATAAAAAGCTTCTTTAGAGCAGCACATTTACATGGTGCTCAAAATGGGGACCAACACCAGAAACAATCCGGAGGGACAAAGGAGAAGGCTGATTCAGAGGTACAGCTGGGGACCACGGGTATGAATCGAGGATAG 2559 42.36 MESRLETLQLFEKEIVAVIGPQSSVAAHVISQIVNGLQVPQLSYGATDPTLSTLQLPFFFRITLSDSYQMAAMADLIDYYGWKEVIAIFLDDDYGRNGISSLGDELHKKMCRISHVFALPSLVNLTKITEILNHSKLLGPRVYVVHVGPDPQLRIFTIAHKLGMLTSNYVWFATDWLATTLDSFSPTDRASLDTLNGVVGLRPHTPESKGKRDLLHRLTNSALNVYGLYAYDSVWVVAKAVDKFLKENGNITFSSTGKVFGSNASGIQLGRLKVFDGGSDLLKVIKQTNYTGLSGRIQFGEDRNIMNGSYDVINIDQKEIRTVGYWSNYSRFSVSPPEALTVKQENFSLDQKLDNVVWPGGKSELPRGWVIADAGKPLRIAFPKRASFVDFVTQVNNTDSVQGYVIDIFKAALKLIPYDVPYKFVPFGDGQINPSYDELVQSVANNVFDAAVGDIAIVTNRTKIVDFSQPYTTTGLIIVAPVQNSKSSAWVFLKPFSAEMWCVTAVSFVIIGIVIWMLEHRINDHFRGPPKRQIITMCLFSFSTLFKANQEATISPLSRLVMLVWLFLLLVITSSYTASLTSILTIQQLWSPIRGIDELVASNLPIGYQVGSFAYDYLTQSLFIPRSRLVKLYDPDDYERALRLGPNGGGVAAIIDELPYLEFFLSKTKEFGMIGQTFTRSGWGFAFQRGSRLAVDMSTALLKLSESGKLQEIHDTWFCKLGCPGQRGGKSEPDQLQLISFWGLYLLCGIISLAALFVFLLRLIHQYIRYQRHHRRSEVVSSSPVSSNIGCTRTIQSFIRFIDEKEEAIKSFFRAAHLHGAQNGDQHQKQSGGTKEKADSEVQLGTTGMNRG 852
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2735954 2743859 - Tan0008956.2 Tan02g0332 742958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0332 852 SMART GluR_14 379 720 IPR001320 GO:0015276(InterPro)|GO:0016020(InterPro)
Tan02g0332 852 Gene3D - 374 488 - -
Tan02g0332 852 Gene3D - 684 718 - -
Tan02g0332 852 Pfam Ligand-gated ion channel 719 750 IPR001320 GO:0015276(InterPro)|GO:0016020(InterPro)
Tan02g0332 852 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 11 800 IPR015683 GO:0005886(PANTHER)|GO:0015276(PANTHER)|GO:0038023(PANTHER)
Tan02g0332 852 FunFam Glutamate receptor 65 233 - -
Tan02g0332 852 FunFam Glutamate receptor 615 722 - -
Tan02g0332 852 Gene3D - 650 683 - -
Tan02g0332 852 SUPERFAMILY Periplasmic binding protein-like II 357 718 - -
Tan02g0332 852 PRINTS Metabotropic glutamate GPCR signature 18 44 IPR000337 GO:0004930(InterPro)|GO:0007186(InterPro)|GO:0016020(InterPro)
Tan02g0332 852 PRINTS Metabotropic glutamate GPCR signature 50 69 IPR000337 GO:0004930(InterPro)|GO:0007186(InterPro)|GO:0016020(InterPro)
Tan02g0332 852 PRINTS Metabotropic glutamate GPCR signature 69 85 IPR000337 GO:0004930(InterPro)|GO:0007186(InterPro)|GO:0016020(InterPro)
Tan02g0332 852 PRINTS Metabotropic glutamate GPCR signature 85 102 IPR000337 GO:0004930(InterPro)|GO:0007186(InterPro)|GO:0016020(InterPro)
Tan02g0332 852 PIRSF IGluLR_plant 2 847 IPR017103 -
Tan02g0332 852 FunFam Glutamate receptor 489 619 - -
Tan02g0332 852 MobiDBLite consensus disorder prediction 821 852 - -
Tan02g0332 852 FunFam Glutamate receptor 373 489 - -
Tan02g0332 852 Pfam Receptor family ligand binding region 7 316 IPR001828 -
Tan02g0332 852 Gene3D - 6 307 - -
Tan02g0332 852 Gene3D - 489 621 - -
Tan02g0332 852 SUPERFAMILY Periplasmic binding protein-like I 11 370 IPR028082 -
Tan02g0332 852 CDD GluR_Plant 376 718 - -
Tan02g0332 852 Pfam Bacterial extracellular solute-binding proteins, family 3 391 496 IPR001638 -
Tan02g0332 852 Gene3D - 65 330 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0332 Tan-Chr2:2735954 Tan02g0334 Tan-Chr2:2735954 0.00E+00 dispersed
Tan02g0331 Tan-Chr2:2735954 Tan02g0332 Tan-Chr2:2735954 0.00E+00 tandem
Tan02g0332 Tan-Chr2:2735954 Tan02g0333 Tan-Chr2:2735954 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0332 K05387 - csv:101203158 1358.58