Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0354 ATGGCCTGGACCCGACTCGCCGCCGTCGGCCACGGCTCCTCCGCCACCGTCTACCTCGCCGCCGCCACCTCCTCCGGGGACCTCTTCGCCGTCAAGTCCGCCGAGCTTCCCAAATCGGACTTCTTGCAAACAGAGCAGAGGATTCTTTCTTCTCTGTCCCACCCTTCCATTGTGGGATACAGGGGATTTGATGTGACGAGAGAAAATGGGAAGCTGATGTATAATCTCTTCATGGATTATGCCGCCGCCGGCACTCTCGCCGATGAAATTCTCAGGCGAGGCGGTCGGATTAAGGAGACGGCGGCGGGGTTCTACACGCGTCAAATTGTCAGAGGGTTGGAGTATTTGCACAAAAGGGGTTTGGTGCATTGCGATGTTAAAGCTAAGAATGTTTTAATCGGTGGAGATGGTTTGAAGATTGCGGATTTCGGATGCTCGAAATGGGTTTGTGAGCCTGCGGCGATCGGCGGAACGCCAATGTTCATGGCGCCAGAGGTGGCGCGTGGGGAGAAACAGGGGATTTCCTCTGACATTTGGGCACTTGGGTGTACTTTAATCGAAATGGTCACCGGCGCTCCACCGTGGCCCACCGGGTGCGACCCAGTTTCGGTTTTGTACCGGATTGGATATTCCGGCGAGTCGCCGGAAATTCCGAGCATTCTATCGGAAAAAGCGAAGGACTTTTTGGAGAAATGCTTAAGAAGAAACCCAACAGAACGGTGGAGCGCGAGCCAACTTCTCGAGCATCCATTTTTGGAGGAATCGAGTTCTGGGTTCGAGGAAATCAAGGAATTACATTCAAATTCAAATTCTCCGACTAGTATTTTGGATCAAGGTCTTTGGAATTCGTTGGAAGAAGAGTCGCAATTGCAATCTGTGTTGAAAACAGAGAAATGGGACGATGACAGAATCAGACGGCTATCGATGTTTTCAGGGGAAATGAAGTGGGAGTTGGAAAATGAGAATTGGATCACAATCAGAGAAAGTGAAAGAGATGAAAGCAACAGAAGCTCTGTGGATGGTGAAGATGAGGCAGAATCCATTTTTGAGTCAACATCAGAAATCGATTCTACAAGAAGTGATTTTGAGGAAAAAGAAACAACAGGTGGTAGTGGGAAACTCAAGTGTTTGGAATGGTTAGATAAAACAGTTAGCTTTAGACTAAGGAAAAGTGATATTGTAATTAGTGATCTTAGTACCAAGAGTGATAGAGCTAACTTTCCTTTACATCTCCATCTCACTTTTTGTTATATAAAAAACATACACACAAATATGAAAATTCTAATAAATTAG 1293 47.02 MAWTRLAAVGHGSSATVYLAAATSSGDLFAVKSAELPKSDFLQTEQRILSSLSHPSIVGYRGFDVTRENGKLMYNLFMDYAAAGTLADEILRRGGRIKETAAGFYTRQIVRGLEYLHKRGLVHCDVKAKNVLIGGDGLKIADFGCSKWVCEPAAIGGTPMFMAPEVARGEKQGISSDIWALGCTLIEMVTGAPPWPTGCDPVSVLYRIGYSGESPEIPSILSEKAKDFLEKCLRRNPTERWSASQLLEHPFLEESSSGFEEIKELHSNSNSPTSILDQGLWNSLEEESQLQSVLKTEKWDDDRIRRLSMFSGEMKWELENENWITIRESERDESNRSSVDGEDEAESIFESTSEIDSTRSDFEEKETTGGSGKLKCLEWLDKTVSFRLRKSDIVISDLSTKSDRANFPLHLHLTFCYIKNIHTNMKILIN 430
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3027367 3030106 - Tan0000267.1 Tan02g0354 742980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0354 430 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524(InterPro)
Tan02g0354 430 MobiDBLite consensus disorder prediction 330 369 - -
Tan02g0354 430 Pfam Protein kinase domain 5 252 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g0354 430 CDD STKc_MAPKKK 3 252 - -
Tan02g0354 430 SUPERFAMILY Protein kinase-like (PK-like) 4 280 IPR011009 -
Tan02g0354 430 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 2 253 IPR052751 GO:0004672(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
Tan02g0354 430 ProSiteProfiles Protein kinase domain profile. 3 252 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g0354 430 SMART serkin_6 3 252 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g0354 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan02g0354 430 Gene3D Transferase(Phosphotransferase) domain 1 2 336 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0354 Tan-Chr2:3027367 Tan03g2290 Tan-Chr3:77105204 2.30E-88 dispersed
Tan02g0354 Tan-Chr2:3027367 Tan05g0893 Tan-Chr5:7131630 3.20E-114 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67186 PF00069 Pkinase 1.90E-55 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0354 K20716 - csv:101205351 561.607