Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0355 ATGGACGCCGCCCCTTCTCCTCCTCCTCCGGCCACCGCCACTCTCCACTTTCCGGTCAACCTCAATTCCACCCTCCACGATCCTCACGAATCTCCTCCTCCACCACCACCTCCGCCGCCTCCTCCTCCTCCTCCTCCTCCGCCCTCCTTCCACGCCCACCGCGCCCTCTTCGATGAGATGAACTTCTTCGCCGCCGATGATAAATCCCGCGTTCTTCTCTCCGACAATCTCACTCCCACCAAGCTCGACTTTAACGTAAACACGGGGTTGAATCTTTTGACGACGAATTCGAGTAGTGATCAATCGACGGTGGACGATGGAGTTTCACCAAACCCAGAAGACAAAAGAGCCAAAAACGAGAGGGCAGTTCTTCAAGCTGAATTGGAGAGAGTAAACACAGAGAATCAACGATTAAAAGACATGTTAAATCAAGTGACCGGTAATTACCAAGCGCTGCAGATGCACTTCACAACGTTAATTCAAAACCAGAAGACGGCCGACGCCGGCGAGCCAATTGACGAGAAGGCCGGCGCCCAAGAAAAGGTCCGACACGGCAGCGGTGGAGGGAATAATAATGGTAATAAGCTGGTGCCGAGACAGTTTATGGATCTCGGATTAGCGACAAATATGGATGCAGATGAACCGTCGATATCGTCCTCGGACGGGAGGAGCGGTGACCGGTCACGTTCGCCAGGAACCACCGGAGAAGTGGCGTCGTCGAAACGGCACAGCCCAGATCAAGGTTCGAATTGGGGTTCGAATAAGGTACCTAAATTCAATTCTTCCTCTTCCGGTAAAGATGTCGATCAGACTGAAGCTACTATGAGAAAGGCTAGAGTCTCCGTCCGAGCCAGATCGGAAGCACCCATGATCACAGATGGATGCCAATGGAGAAAATATGGACAAAAAATGGCGAAGGGAAACCCTTGTCCTCGAGCTTACTATCGATGCACCATGGCCGCCGGCTGCCCAGTTCGAAAACAAGTACAAAGATGTGCAGAAGACAAAACAATTTTGATAACAACCTACGAAGGCAACCACAACCACCCATTGCCGCCGGCCGCCATGGCAATGGCTTCAACAACATCATCAGCGGCAAGAATGCTTCTATCAGGATCCATGTCAAGTGCTGATGGTTTAATGAACTCAAATTTTCTAGCAAGAACCCTATTGCCATGCTCTTCAAGCATGGCTACAATCTCCGCCTCCGCCCCGTTTCCAACTGTCACATTAGACCTAACACAAACTCCTAATCCTTTATTCCAACGGTCGACCCCGGGTCACTTCCCGATCCCGTTCGCTACCGGTCCACCCCAAAGCTTCCCACAAATCTTTGGACATGCATTGTACAATCAATCGAAATTCTCCGGCCTCCAAATGTCCAAGGACATAGAAGTATCGCCGCCGCCTCCACCGCAAAATCCATTGGCCGACACGTTGAGCGCGGCGAGTGCAGCGATCGCTTCCGACCCGAATTTCATTGCGGCATTGGCGACGGCAATGACGTCGCTAATAGGCGGGTCTCATCAGAAGGAAAATGGTAATGGCAATAATAATGTTGATAACAATACAACTAGCAACTCCCAACAGTAA 1593 51.22 MDAAPSPPPPATATLHFPVNLNSTLHDPHESPPPPPPPPPPPPPPPPPSFHAHRALFDEMNFFAADDKSRVLLSDNLTPTKLDFNVNTGLNLLTTNSSSDQSTVDDGVSPNPEDKRAKNERAVLQAELERVNTENQRLKDMLNQVTGNYQALQMHFTTLIQNQKTADAGEPIDEKAGAQEKVRHGSGGGNNNGNKLVPRQFMDLGLATNMDADEPSISSSDGRSGDRSRSPGTTGEVASSKRHSPDQGSNWGSNKVPKFNSSSSGKDVDQTEATMRKARVSVRARSEAPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMAAGCPVRKQVQRCAEDKTILITTYEGNHNHPLPPAAMAMASTTSSAARMLLSGSMSSADGLMNSNFLARTLLPCSSSMATISASAPFPTVTLDLTQTPNPLFQRSTPGHFPIPFATGPPQSFPQIFGHALYNQSKFSGLQMSKDIEVSPPPPPQNPLADTLSAASAAIASDPNFIAALATAMTSLIGGSHQKENGNGNNNVDNNTTSNSQQ 530
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3055217 3059491 - Tan0017615.1 Tan02g0355 742981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0355 530 Gene3D WRKY domain 276 353 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan02g0355 530 SUPERFAMILY Formin homology 2 domain (FH2 domain) 38 43 - -
Tan02g0355 530 SMART WRKY_cls 291 351 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan02g0355 530 MobiDBLite consensus disorder prediction 28 50 - -
Tan02g0355 530 FunFam probable WRKY transcription factor 31 276 353 - -
Tan02g0355 530 SUPERFAMILY WRKY DNA-binding domain 284 352 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan02g0355 530 MobiDBLite consensus disorder prediction 508 530 - -
Tan02g0355 530 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 104 511 IPR044810 GO:0003700(InterPro)
Tan02g0355 530 ProSiteProfiles WRKY domain profile. 286 352 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan02g0355 530 MobiDBLite consensus disorder prediction 94 108 - -
Tan02g0355 530 MobiDBLite consensus disorder prediction 94 118 - -
Tan02g0355 530 MobiDBLite consensus disorder prediction 212 269 - -
Tan02g0355 530 Pfam WRKY DNA -binding domain 293 350 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Tan02g0355 530 Coils Coil 114 148 - -
Tan02g0355 530 MobiDBLite consensus disorder prediction 1 50 - -
Tan02g0355 530 MobiDBLite consensus disorder prediction 210 285 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0355 Tan-Chr2:3055217 Tan03g2288 Tan-Chr3:77077856 4.00E-122 dispersed
Tan02g0355 Tan-Chr2:3055217 Tan09g2157 Tan-Chr9:71677977 3.30E-44 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
26666 PF03106 WRKY 2.40E-24 CL0274 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0355 - - - 0.0