Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0372 ATGAACCCTCGATTTGGGTTTTTGTTGTTGGTTTTGATCTCTGTTCTACTGGGAGCTGATTCAAGATGCCCAAGAACATGCGATGTAGCTTTAGGTTCATACTACCTATGGCCGAACAACAATTTGACTTTCATCTCCAAAATGTTTGAGTTGCCGTCAGCTGATAACATCGTCAGCTACAACCCAGTTAAAGTTCCCAACAAAGACACTATTACCAGCGGCGACAGGATCAACGTTCCATTCTCCTGTGACTGTATTAGCGATACGTTTCTGGGTCATACGTTTCAGTACACGATTAAGAGTGGAGATACTTACAATGAAATTGCGACCAAATTCTACTCGGGCTTGACTACGGTGGACATGTTACAGAGATTCAATCGTTTTGATGTTCTTAATCTTCCTCCAAATGGGACTTTGGATGTGGTGGTGAATTGCTCCTGTGGGGATCCTGATGTTTCAAAGACATATGGGTTGTTTGTCACTTACCCAATTCGATCCGAAGATAGTTGGGCTAACTTGGAAAGAGATACAAATGTAAGCTCGACTTTGCTGCGGCAGTACAATCCGAATGTGGATTTCAACGTAGGAAATTTGATCTTTATTCCAGGCAGAGATCAAAGTGGCAACTATCCACCTCTGAATCTAAGCACAGGACTTGCACGTGGAGCCATTGCAGGCATAATTATAGGTGCAGTACTTGGGGTTTTACTTCTGGCGGGTGTCATTTACATTGTCATTCGAAGGAGGAAGTCGAAAAGTTCGAAATTGCTGGCATTCTCCCAAGATTTGTCTTCTCAAGATGGGCGTGGTCTTGTCCCTGGAAGTTCCTTAGATAAATCTACTGAATCAAATGGTCAAGGTGGTGGTGGTATAGCTGCAGTTACACATATTACTGTAGAAAAATCAGTGGAGTTCTCACTTGAAGAACTTGCCAAGGCCACCAACAACTTTAGCTTGGGTAACAAAATCGGTGAAGGTGGTTTTGGATCGGTTTACTATGCAGAACTCAGAGGAGAGAAAGCTGCAATAAAGAAGATGGATATGCAAGCTACAAGGGAGTTCCTTGCGGAAATTAAGGTTCTAACACGCGTTCACCACTTGAACCTGGTGCGCTTGATAGGATATTGTGTTGAGAATTCTCTATTCCTAGTGTATGAGTACATTGAGAATGGCAACTTAGGCCAACATTTACGTGGCACAGGTCGGGATCCATTGCCATGGCCTTCTAGGGTCCAGATAGCTCTCGATTCAGCTCGAGGCCTCGAATATATCCATGAGCACACCGTTCCAGTTTATATTCATCGTGATATTAAATCCGCCAACATATTGATTGACAAAAATTTTCATGGAAAGGTTGCAGACTTTGGATTAACCAAGTTGACAGAAGTTGGAAATTCGTCGCTTCCTACTCGTCTTGTGGGCACATTTGGATATATGCCACCCGAATATGCACAATATGGTGACGTTTCTCCAAAAATCGATGTATATGCTTTCGGCGTCGTTCTTTATGAGCTTATTTCAGCTAAGGAAGCTGTGGTCAAGACAAACAAAGCCACTGCAATTAATGAATCAAAAGGCCTCGTCGCTTTGTTTGAAGATGTCCTGAATCAACCCGACGCAAAAGAGAACCTTCACAAACTAGTAGACCCAAGACTCGAAGAGAACTACCCTCTCGATTCGGTTTTCAAGATGGCTCAGCTTGCCAAGGCATGTACACATGAGAATCCACAGCTACGCCCAAGCATGAGATCCATTGTGGTTGCTCTCATGACACTTTCTTCTGCAACAGAGGATTGGGACGTCGGATCTTTCTACGAAAACCAAGCTCTCGTTAACTTGATGTCGGGAAGGTAG 1854 43.58 MNPRFGFLLLVLISVLLGADSRCPRTCDVALGSYYLWPNNNLTFISKMFELPSADNIVSYNPVKVPNKDTITSGDRINVPFSCDCISDTFLGHTFQYTIKSGDTYNEIATKFYSGLTTVDMLQRFNRFDVLNLPPNGTLDVVVNCSCGDPDVSKTYGLFVTYPIRSEDSWANLERDTNVSSTLLRQYNPNVDFNVGNLIFIPGRDQSGNYPPLNLSTGLARGAIAGIIIGAVLGVLLLAGVIYIVIRRRKSKSSKLLAFSQDLSSQDGRGLVPGSSLDKSTESNGQGGGGIAAVTHITVEKSVEFSLEELAKATNNFSLGNKIGEGGFGSVYYAELRGEKAAIKKMDMQATREFLAEIKVLTRVHHLNLVRLIGYCVENSLFLVYEYIENGNLGQHLRGTGRDPLPWPSRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFHGKVADFGLTKLTEVGNSSLPTRLVGTFGYMPPEYAQYGDVSPKIDVYAFGVVLYELISAKEAVVKTNKATAINESKGLVALFEDVLNQPDAKENLHKLVDPRLEENYPLDSVFKMAQLAKACTHENPQLRPSMRSIVVALMTLSSATEDWDVGSFYENQALVNLMSGR 617
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3162581 3167471 - Tan0000020.1 Tan02g0372 742998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0372 617 ProSitePatterns Serine/Threonine protein kinases active-site signature. 432 444 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan02g0372 617 FunFam PTI1-like tyrosine-protein kinase 3 388 603 - -
Tan02g0372 617 Gene3D Transferase(Phosphotransferase) domain 1 388 608 - -
Tan02g0372 617 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 9 616 IPR044812 GO:0019199(InterPro)|GO:0045087(InterPro)
Tan02g0372 617 Gene3D Phosphorylase Kinase; domain 1 302 387 - -
Tan02g0372 617 ProSiteProfiles Protein kinase domain profile. 317 592 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g0372 617 SMART serkin_6 317 591 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g0372 617 SUPERFAMILY Protein kinase-like (PK-like) 300 589 IPR011009 -
Tan02g0372 617 MobiDBLite consensus disorder prediction 265 288 - -
Tan02g0372 617 FunFam LysM receptor kinase 2 296 387 - -
Tan02g0372 617 Pfam Protein kinase domain 318 586 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g0372 617 Pfam LysM domain 97 136 IPR018392 -
Tan02g0372 617 CDD LysM 97 127 IPR018392 -
Tan02g0372 617 ProSitePatterns Protein kinases ATP-binding region signature. 323 345 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0372 Tan-Chr2:3162581 Tan04g2688 Tan-Chr4:86351858 5.60E-75 dispersed
Tan03g1432 Tan-Chr3:70731798 Tan02g0372 Tan-Chr2:3162581 1.60E-50 dispersed
Tan02g0372 Tan-Chr2:3162581 Tan04g1280 Tan-Chr4:12354703 1.80E-78 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67187 PF00069 Pkinase 6.40E-46 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0372 K13429 - csv:101203576 1039.64