Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0389 ATGGCACAGTTGCCGCCGAAGATCCCAAATATGGCGCCTAATAATTGGCCGGAATTTCCTCGTCAGAAAATCCATTCAATGGAAAGTTTTGCACCGACCACGGCCGCGGTTACCCACCAGAATCCTTCTTGGGTCGACGAATTTCTAGATTTTTCCTCCGCCAGACGAGGCTCCCACCGCCGCTCGGTTAGCGATTCGATCACATTCCTCGAAATGCCAATGCTGGAGGAAGATTGCCGGGGCTCTGCCGCCGCGCCGACGCCTGGATCCGGCGAAGACCAGAATATTGAATTTGATAGATTCGACGACGAGCAATTTCTGTCGATGTTCAACGATGAAATCTCCGCCGCCGTCGCGCCCACCGTGTCGTCGTCGAATCCCTCCACGCCGTCCGATCACCACAGCATTAACGACGAGAAAGACGGCCAAAACGACGGCAAACAAAACCAGAACAAAAACGAATCCGACGAAGTACAGAGCCAACAGAAATCGGAAACTCCAACGCAATCCAATTCCACGACGGCGGCGGCGGCGGCTTCCACCGATCGGATAACAGACCCCAAAAGAGTCAAAAGAATTCTGGCAAATCGGCAATCGGCGCAAAGATCACGAGTGAGGAAGCTTCAATACATATCAGAACTCGAACGAAGCGTCACATCGTTACAGGCTGAAGTTTCGGTGCTGTCGCCGCGAGTGGCGTTTTTGGACCACCAGAGATTGCTTCTCAACGTCGACAACAGTGCTCTGAAGCAAAGAATCGCCGCCCTTGCTCAGGATAAGATTTTTAAAGATGCTCATCAAGAGGCTCTAAAAAGAGAGATAGAGAGACTGAGACAAGTATATCACCAACAAAGCATCAAGAAGATGGAAAATGCAGCTCCATCACCATTGCCACCGCCACCAACTCCGTCACCACCCGCCACCATCTCCACCACCGCCACCGCCACCGCCACCGACACTAAACTTTCCAATGTAGATCAAAATGACCAAGCTCTAAACGTCGTCGTTTAA 1011 51.73 MAQLPPKIPNMAPNNWPEFPRQKIHSMESFAPTTAAVTHQNPSWVDEFLDFSSARRGSHRRSVSDSITFLEMPMLEEDCRGSAAAPTPGSGEDQNIEFDRFDDEQFLSMFNDEISAAVAPTVSSSNPSTPSDHHSINDEKDGQNDGKQNQNKNESDEVQSQQKSETPTQSNSTTAAAAASTDRITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHQQSIKKMENAAPSPLPPPPTPSPPATISTTATATATDTKLSNVDQNDQALNVVV 336
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3330886 3333489 - Tan0016579.1 Tan02g0389 743015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0389 336 Coils Coil 267 287 - -
Tan02g0389 336 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 186 238 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g0389 336 MobiDBLite consensus disorder prediction 119 189 - -
Tan02g0389 336 MobiDBLite consensus disorder prediction 293 307 - -
Tan02g0389 336 Pfam Basic region leucine zipper 185 233 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g0389 336 MobiDBLite consensus disorder prediction 153 180 - -
Tan02g0389 336 MobiDBLite consensus disorder prediction 133 152 - -
Tan02g0389 336 SMART brlzneu 184 248 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g0389 336 MobiDBLite consensus disorder prediction 289 328 - -
Tan02g0389 336 FunFam Basic leucine zipper 61 187 260 - -
Tan02g0389 336 Gene3D - 187 260 - -
Tan02g0389 336 SUPERFAMILY Leucine zipper domain 188 242 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g0389 336 CDD bZIP_plant_RF2 189 239 IPR044759 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g0389 336 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 191 206 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g0389 336 PANTHER BASIC LEUCINE ZIPPER 34 1 305 IPR052483 GO:0003677(PANTHER)|GO:0005634(PANTHER)|GO:0045893(PANTHER)
Tan02g0389 336 MobiDBLite consensus disorder prediction 308 328 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0389 Tan-Chr2:3330886 Tan02g0740 Tan-Chr2:6960732 7.60E-10 dispersed
Tan01g4352 Tan-Chr1:108462215 Tan02g0389 Tan-Chr2:3330886 7.70E-60 transposed
Tan04g1419 Tan-Chr4:16464132 Tan02g0389 Tan-Chr2:3330886 9.50E-08 transposed
Tan05g0501 Tan-Chr5:3445285 Tan02g0389 Tan-Chr2:3330886 1.70E-08 transposed
Tan08g2383 Tan-Chr8:75149337 Tan02g0389 Tan-Chr2:3330886 1.30E-08 transposed
Tan02g0389 Tan-Chr2:3330886 Tan05g0914 Tan-Chr5:7367698 2.60E-42 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
26679 PF00170 bZIP_1 3.30E-09 CL0018 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0389 - - - 0.0