Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0457 ATGTCTCAGAATTCTAAGTTCTCTTGTTCTAAGGTCAGATTACCTGCTGGTTTCAAGGCGAAGAGGGCTAAGGAGCATTTCCATGGCCAACGGTGGAGTAACCTTCTTTATCTCTTTCCATTTGGCTTAATTTTGATTCTGGGTCTTTGGTCTATTTTTAGTCTTTGTGATGGGAATTCTGTTCGGGAAGTAGAGATTCCAGATACGTGTAAAGAGAAGGCCTGGAACTTGCTGAAGCATTTCAATGTCAGCGAGAGTCAGTTTCATGCTTTGGCTTCATTCTTCTTTCGTTCAGATCAGGCAGCATCTCTCCAGTGTGCTAAAGACACAGGGCCTGGTATTGCACTGAAAGATTGCATCGCTTGCGCTTTGAAGATACTAGAAGAGGAGCAAAACTTGCAAAAGCAGCATGGGTGGCTTTCTGAAAATTTACAATCTGAAGGCCAGTGCCCAATTAGGGGTGAGATGGACTCCTTCAATATTGATCTATTGCAGCTAGTGGACAAGACACGGTCACTTACTTCACAATCTTCTTTTTCTTTTGTGTCTCCTTGTCATCAGATTCATAGAGAGAAGATCTTGCATACTAGGGAAATTGGAAATGAGCATTCTCGAAGTTTGAATGGATTAGTAATGGTGTGCTTATGGATCCTTGCTGTAGTGATATCATGCCTGAAGATGTCTAGTTTTCATTTGAAATTAAGGAACCATAAACACAAGCCAATAAAACATCCAACAGTTGAGAATCAGCCAGTGACTCAACTGCAGCAGGTGTTGCTACAGCAGAAGCAGTTAGATCTATCTCCAAGTCCTCCTAAAGGGGCTGGAAAATGGAGAAAGAAGCTTCTTATAATATTTGTTTTACTTGGAATTTTTGGATCCTTTTGGCTCTTTTGGTATTTGAACAACAAAATCATCTTGAGGAGAGAAGAAACACTTGCTAACATGTGCGATGAGCGAGCTCGAATGTTACAAGATCAATTCAACGTTAGCATGAACCATGTTCATGCCTTGGCTATTCTGGTCTCCACTTTTCATCATGGCAAGCATCCTTCTGCCATTGATCAGAAAACATTCAGTGAATATGCCGAAAGAACAGCTTTCGAACGACCACTAACCAGTGGGGTGGCTTATGCTTTGAAAGTTAATAATTCAGAAAGAAAGCGATTTGAAGAGGAACATGGGTGGACAATTAAGAAGATGGGAACAGAGGACCAGACTCTGGTTCAGGATTGCATTCCTGAGAATTTAGACCCTGCTCCGTTTCAGGATGAATATGCACCTGTGATTTTTTCACAAGAAACTGTATCACATATAGTTTCCATTGACATGATGTCAGGAAAGGAAGACCGCGAAAACATCTTGCGAGCGAGGGCTTCAGGGAAGGGAGTGCTGACATCTCCTTTCAAGCTTCTTAAGTCCAATCACCTTGGTGTTGTACTCACTTTTGCTGTCTATAACACTGACCTTCCTCCTGATGCAACACCAGAGCAACGCACTGAAGCTACTGTTGGGTATCTAGGAGCATCCTATGATGTTCCATCACTGGTGGACAAGCTTCTGCACCAACTTTCCAGCAAACAATCAATTGTTGTTGATGTTTATGATACAACTAATGCATCTGCTTCCATCAAGATGTATGGATCTGATGTGATTGATACTGGTCTATTGCACATTAGCAACCTGGATTTTGGAGACCCACAAAGGAAGCATGAGATGCATTGCAGATTTAAGCAGAAGCCTCAATTACCATGGATGGCTATAAATGCATCAGTGGGAGTTCTAGTTATTACTTTACTCGTTGGCCATATATTTTATGCGGCCATAAGTCGAATCGCAAAAGTGGAGAATGACTATCGTGAGATGATGGGACTCAAAACTCGTGCTGAAGCTGCAGATGTGGCAAAGTCTCAGTTTCTTGCAACTGTTTCCCATGAGATCAGGACGCCAATGAATGGTGTTTTAGGAATGCTGAAAATGCTGATGGACACTGATCTTGACCCAAACCAACAGGACTATGCCCAGACTGCATATGATAGTGGGAAAGAATTAATATCACTAATAAATGAGGTTCTTGACCAAGCTAAAATAGAATCAGGCAGGCTTGAACTTGAAGATGTACCTTTCGATCCACGAGCTTTACTGGATAATGTGCTGTCAATGTTCTCTGGAAAATGTCATGAGAAGGGGATAGAGCTAGCTGTTTATGTCTCTAATCTGGTCCCTGAAGTTCTCATTGGTGACCCTGGACGCTTTCGACAGATAATTACCAATCTCGTGGGAAATTCAATTAAGTTCACCAACGACAAAGGACACATATTTGTTACTGTACACCTGGCAGACGAAGTGAGGACACCACTTGATGCAATGGACAGTGTGCTAAGACAAGGCTTAGATTTAGTAAGAGAGATGACGGGAAAAAGTCATAATACACTAAGCGGGTTTCCAGTGGTCGAAAGGTGCAAGAGTTGGGAGTGTTTCGAGTTATTTAGTAGAACAGATGCAATGAAGGAAGATGACTTAATTAAATTGCTTGTATCAGTCGAGGATACAGGTCATGGAATTCCTTTAGAAGCGCAAAGTCGAATTTTTATGCCTTTTATGCAAGCTGATAGTTCCACTTCGCGCAAGTATGGTGGAACTGGAATAGGTCTGAGCATCAGCAAATGTCTGGTGGATCTAATGGGTGGAGAGATAGGTTTTGTGAGCCAACCTGGTGTTGGCAGCACATTTTCATTTACTGGATGTTTGAGAAAAGGCGACACAAAGTCTCTCGATACAAAGTGGCAGCAGAATGATCCAACTGTATTAGATTTCCGAGGACTTCGAGCATTGGTAATAGATAATAGAAGCATTAGAGCTGAGGTAACAAAATATCATCTCAAGAGGTTAGGGATCTCGGTAGATATAGTTTCAAGTCTGGTTTCAGCACATGTATACTTAACCAATAATTGCATCAAAAGTCCATCCAAGCCTTTGGCCATGGTTCTTATTGACAAAGATGTATGGAATAAGGAAACCGGTCCGATGATCGCTCGTGTATTTAAAGAACATGGGGTAAATGGCAAAGAAGAATCAACACCAAGTCCTAAGATCTTTCTCTTGGCTACCTCCGACCTTCAAGAGATGAGAGCTCTGAAGTCGACCGGTTATGTTAATAATGTAATGACAAAACCCCTTAGGTTGGGCGTCTTGATTGGATGTTTCCAGGAAGCCTTTGGGAAGGTAAATAGAAAGAAACCTTCTATTCTCGGGAACTTACTGAGAGAAAAGCAAATACTGGTGGTTGATGACAATGCAGTTAATAGAAGAGTTGCAGAAGGAGCTCTAAAGAAATATGGAGCAAAGGTTACCTGTGTGGAAAGTGGTGGAGCTGCTATTTCATTGTTATATCCACCACATAAGTTCCATGCTTGCTTCATGGATCTTCAGATGCCTGAGATGGATGGGTTTGAAGCAACACGACAGATACGAAATATCGAAAATAAGGTTAATGAGGACATTGCTTCTGGGAAAGCATCAATTGAGATGTTTGGGAATGTGGCTCATTGGCATACACCAGTATTGGCCATGACAGCTGATGTGATACAGGCTACAAATGAAGCATGCATGAATTGTGGGATGGATGGTTATGTCGCAAAGCCTTTCGAAGAGGAAAAATTATATTCAGCGGTAGCTCGTTTCTTCGTCCGATGA 3696 41.88 MSQNSKFSCSKVRLPAGFKAKRAKEHFHGQRWSNLLYLFPFGLILILGLWSIFSLCDGNSVREVEIPDTCKEKAWNLLKHFNVSESQFHALASFFFRSDQAASLQCAKDTGPGIALKDCIACALKILEEEQNLQKQHGWLSENLQSEGQCPIRGEMDSFNIDLLQLVDKTRSLTSQSSFSFVSPCHQIHREKILHTREIGNEHSRSLNGLVMVCLWILAVVISCLKMSSFHLKLRNHKHKPIKHPTVENQPVTQLQQVLLQQKQLDLSPSPPKGAGKWRKKLLIIFVLLGIFGSFWLFWYLNNKIILRREETLANMCDERARMLQDQFNVSMNHVHALAILVSTFHHGKHPSAIDQKTFSEYAERTAFERPLTSGVAYALKVNNSERKRFEEEHGWTIKKMGTEDQTLVQDCIPENLDPAPFQDEYAPVIFSQETVSHIVSIDMMSGKEDRENILRARASGKGVLTSPFKLLKSNHLGVVLTFAVYNTDLPPDATPEQRTEATVGYLGASYDVPSLVDKLLHQLSSKQSIVVDVYDTTNASASIKMYGSDVIDTGLLHISNLDFGDPQRKHEMHCRFKQKPQLPWMAINASVGVLVITLLVGHIFYAAISRIAKVENDYREMMGLKTRAEAADVAKSQFLATVSHEIRTPMNGVLGMLKMLMDTDLDPNQQDYAQTAYDSGKELISLINEVLDQAKIESGRLELEDVPFDPRALLDNVLSMFSGKCHEKGIELAVYVSNLVPEVLIGDPGRFRQIITNLVGNSIKFTNDKGHIFVTVHLADEVRTPLDAMDSVLRQGLDLVREMTGKSHNTLSGFPVVERCKSWECFELFSRTDAMKEDDLIKLLVSVEDTGHGIPLEAQSRIFMPFMQADSSTSRKYGGTGIGLSISKCLVDLMGGEIGFVSQPGVGSTFSFTGCLRKGDTKSLDTKWQQNDPTVLDFRGLRALVIDNRSIRAEVTKYHLKRLGISVDIVSSLVSAHVYLTNNCIKSPSKPLAMVLIDKDVWNKETGPMIARVFKEHGVNGKEESTPSPKIFLLATSDLQEMRALKSTGYVNNVMTKPLRLGVLIGCFQEAFGKVNRKKPSILGNLLREKQILVVDDNAVNRRVAEGALKKYGAKVTCVESGGAAISLLYPPHKFHACFMDLQMPEMDGFEATRQIRNIENKVNEDIASGKASIEMFGNVAHWHTPVLAMTADVIQATNEACMNCGMDGYVAKPFEEEKLYSAVARFFVR 1231
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4297513 4311647 - Tan0018156.1 Tan02g0457 743083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0457 1231 SMART HisKA_10 635 700 IPR003661 GO:0000155(InterPro)|GO:0007165(InterPro)
Tan02g0457 1231 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 689 914 IPR036890 -
Tan02g0457 1231 Gene3D - 699 919 IPR036890 -
Tan02g0457 1231 SUPERFAMILY CheY-like 938 1074 IPR011006 -
Tan02g0457 1231 PANTHER TWO-COMPONENT HISTIDINE KINASE 276 1228 IPR050956 -
Tan02g0457 1231 Pfam Response regulator receiver domain 1093 1225 IPR001789 GO:0000160(InterPro)
Tan02g0457 1231 Gene3D - 607 698 - -
Tan02g0457 1231 FunFam Histidine kinase 4 607 698 - -
Tan02g0457 1231 ProSiteProfiles Histidine kinase domain profile. 642 919 IPR005467 -
Tan02g0457 1231 Gene3D - 1086 1231 - -
Tan02g0457 1231 Gene3D - 936 1078 - -
Tan02g0457 1231 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 621 701 IPR036097 GO:0000155(InterPro)|GO:0007165(InterPro)
Tan02g0457 1231 SUPERFAMILY CheY-like 1089 1228 IPR011006 -
Tan02g0457 1231 SMART CHASE_2 350 549 IPR006189 -
Tan02g0457 1231 CDD REC_hyHK_CKI1_RcsC-like 1093 1225 - -
Tan02g0457 1231 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 843 914 IPR003594 -
Tan02g0457 1231 PRINTS Bacterial sensor protein C-terminal signature 879 897 IPR004358 GO:0016310(InterPro)|GO:0016772(InterPro)
Tan02g0457 1231 PRINTS Bacterial sensor protein C-terminal signature 844 858 IPR004358 GO:0016310(InterPro)|GO:0016772(InterPro)
Tan02g0457 1231 PRINTS Bacterial sensor protein C-terminal signature 903 916 IPR004358 GO:0016310(InterPro)|GO:0016772(InterPro)
Tan02g0457 1231 PRINTS Bacterial sensor protein C-terminal signature 862 872 IPR004358 GO:0016310(InterPro)|GO:0016772(InterPro)
Tan02g0457 1231 ProSiteProfiles Response regulatory domain profile. 1092 1229 IPR001789 GO:0000160(InterPro)
Tan02g0457 1231 Pfam CHASE domain 353 547 IPR006189 -
Tan02g0457 1231 FunFam Histidine kinase 4 354 581 - -
Tan02g0457 1231 CDD HisKA 635 696 IPR003661 GO:0000155(InterPro)|GO:0007165(InterPro)
Tan02g0457 1231 Gene3D CHASE domain 354 581 IPR042240 -
Tan02g0457 1231 Gene3D - 301 353 - -
Tan02g0457 1231 Gene3D - 58 101 - -
Tan02g0457 1231 CDD HATPase_EvgS-ArcB-TorS-like 752 917 - -
Tan02g0457 1231 ProSiteProfiles CHASE domain profile. 350 574 IPR006189 -
Tan02g0457 1231 SMART HKATPase_4 747 919 IPR003594 -
Tan02g0457 1231 SMART REC_2 1091 1225 IPR001789 GO:0000160(InterPro)
Tan02g0457 1231 ProSiteProfiles Response regulatory domain profile. 943 1073 IPR001789 GO:0000160(InterPro)
Tan02g0457 1231 Pfam His Kinase A (phospho-acceptor) domain 635 700 IPR003661 GO:0000155(InterPro)|GO:0007165(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0457 Tan-Chr2:4297513 Tan05g0969 Tan-Chr5:7969236 0.00E+00 dispersed
Tan02g0457 Tan-Chr2:4297513 Tan02g0458 Tan-Chr2:4297513 0.00E+00 tandem
Tan04g1702 Tan-Chr4:37649833 Tan02g0457 Tan-Chr2:4297513 4.00E-272 transposed
Tan02g0457 Tan-Chr2:4297513 Tan05g0968 Tan-Chr5:7969236 0.00E+00 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
26684 PF03924 CHASE 3.50E-35 CL0165 Tan TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0457 K14489 - vvi:100263145 1577.38