Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0526 ATGAACCAGACAAATTCCATACTTACATTTCGTACACATGCAAGAGAGAAAGATCAGAAAATGGATGAGAAGACAGAAACCAAAGAGTTATCAAGCTCTAATCTCTCCTCTTCTGCTTATAAAATCAGCTTTTTAGAGAAGAGAAAACCAATTGAAGTCTTTCAAGTGCCTGCAAGTTTGGGAGACGGCCATTCCAAAGGCGAGAGCGATTCCACTCATGAGCAGGGTGAGGCAAAATCATCCCTCACTTCCTTTTTTCCAGCTGTCAGCAAGGAAGAATCCAGAAAGTGGATGGCATTTGAAATTGAAAACTTTGATATTAAAAAGACATACACAAAGAACTTCAGTCGAAGCTTTGGGTCATCTTCTATTGAACTCTTGGAAAGAATCATGACAGAGAGGACTGTAGAGGAGAACAAGTCATCGCTGCAGCTGACTTATGTTATCTCAGATGCAAGAAAACCAGATTGTCCCATCGTGTTTGCCAGTGATGCGTTCTTGGTTATGACTGGATATACGATGGAGGAGGTCATTGGAAGGAACTGCCGGTTTCTTCAAGGACCAGAGACAGATAAGAATGAAGTAGCCAAAATACGAGATGCTATCAGAAAGGGGAATAGCTACTGTGGCAAGCTTTTGAACTACAAGAAGAATGGTACTCCTTTCTGGAATCTTCTCACTGTTGGGCCTGTCAAAGATTCCCATGGCAACATCATCAAACTTATTGGAATGCAGGTTGAGATCGGCAAAAACGCTGAAGTAAAAGAGAAGACCATGAGGTCCAGGTCCATTACAGAGGTCCAAGCTGTGAAAAGTCTAAGATCTTACATTCAGTCAAAAAGGTATGATGCTGATAGAAAGCACGAAGAGCCGGAAATAACTAACATCGATTATGCATTGCACAAGGCTGTGGATGATGAGAATATTGACACACCTGATAACCAAAAGGCTCAGTTAGATCTCATAAATGGTCTAAAGGATTCAAGCACAGAATCAGGATTATCTGGTCTTGTTTCCCCAATGAGGTTCAAAGAAAGGACTCTAGGCTCTGCAGTAGAACGTGAAGAAAAGACAGTTGTTGAGATATCAGTTTTGAAGCCTAAAGACGGTGATCGTGTTGCTAAAAGAGAAAGGGACATACGCCAGGGAATTGAATTGGCAACCACATTGGAACGAATCGAGAAGATATTTTTTATCACTAACCCAAGACTTCCTGATAATCCTATTATATTTGCATCTGATAGATTTCTTGACTCGACAGAATACACGTGTGAAGAAGTTCTAGGGAGAAACTTTTGGTTTCTTCAGGGACCTGAAACAGATAAAGTAGTTGTCTCAAAGATAAAAGATGCAATTGTAGAGCAGAGAGAAATCACCGTTCAGATAATCAACTATACAAAGAGTGGAAAAAAGTTCTCGAATTTATTCCATTTGCAACCCATGCATGATAAGAAGGGTGAACTTCAATACTTCATTGGTGTGCAACTTCATCTAAAACCTTTGAGAGACCAACTTTTGGAACGAATGGAACATGAAAGTACTCAACTGGTCAAAGCTATAGCAGAAAATGTTGACAGGGCTGTCCGTGAACTTCCTGATGCCAACTTGAAACCAAAGAACTTATGGGCAATCTACTGTCAGCCAGTCATACCAAGGCCTCACAAGAAAGACAATTCTTCCTGGATAGCCATACAAAAGATTACCAGTCATGGTGAAAAGATTGGACTCCATCATTTTAAGCCAATAAAACCACTGGGTTTTGGAGACATTGGCAGTGTTCATTTGGTAGAACTCAAAGGAACAAGAGAACTCTTTGCTATGAAGGCAATAGAGAAGTCAGTAATATTAAATCGTAACAAGGTTCACCGAGCATGCATGGAAAGGGAAATCATATCCCTTTTGGATCATCCTTTCATGCCAACACTGTACTCTTCATTTCAGACACCTACGCACATTTTTCTGATTATAGACTTCTGCCCGGGTGGAGAGTTATTCGCCTTTCTTGACAAGCAGCCAATGAAAATGTTTAAAGAGGAAGCTGCTAGGTTCTATGCAGCAGAAGTTGTCATTGCTTTGGAATACCTTCACTGTTTAGGTATTATCTACAGGGACCTAAAACCCGAAAACATTCTACTCCAGAAGGATGGGCATATCGTCCTCACTGATTTTGATTTATCGTTTAAGACGCCCAACTTTCAAACCATAGAATCTCCAACACCAAAGAAGACTAAGAGATGTAGACATAAATCGCTACCAACCTTCGTCGTCGAACCTGTTGTAAAACTAAATTCATTCATTGGAACTGAAGAGTACATTGCTCCAGAGATCATAATGGGAGCAGGCCATAGTAGCTCTATTGACTGGTGGACTCTCGGTGTTTTGTTGTATGAGATGCTCTATGGTCGCACTCCCTTCAAAGGCAAAAACAGGAAGAAAACATTTGCCAATATCTTGTTCAAGGACTTAACCTTCCCCTTCAGTATTCAGGTGAGTCTAGCAGCAAAGCAGCTGATTGATGCACTACTACAGAGAGACCCTGCACGTCGTCTAGGATCGAGTACCGGTGCCGATGAAATCAAACGACACCCTTTTTTCCGTCAAATAAATTGGCCTAAAATTCGAACCATGACCCCACCATCATCAGAAGTAGCCCTTCAATTAATTGAGAGAGATCCAAAAGCTAATGATTTGAAGTGGGAAGATGGAGTGCTCAGTCATTCATCAATGAGCACTGATATTTTCTAA 2745 40.95 MNQTNSILTFRTHAREKDQKMDEKTETKELSSSNLSSSAYKISFLEKRKPIEVFQVPASLGDGHSKGESDSTHEQGEAKSSLTSFFPAVSKEESRKWMAFEIENFDIKKTYTKNFSRSFGSSSIELLERIMTERTVEENKSSLQLTYVISDARKPDCPIVFASDAFLVMTGYTMEEVIGRNCRFLQGPETDKNEVAKIRDAIRKGNSYCGKLLNYKKNGTPFWNLLTVGPVKDSHGNIIKLIGMQVEIGKNAEVKEKTMRSRSITEVQAVKSLRSYIQSKRYDADRKHEEPEITNIDYALHKAVDDENIDTPDNQKAQLDLINGLKDSSTESGLSGLVSPMRFKERTLGSAVEREEKTVVEISVLKPKDGDRVAKRERDIRQGIELATTLERIEKIFFITNPRLPDNPIIFASDRFLDSTEYTCEEVLGRNFWFLQGPETDKVVVSKIKDAIVEQREITVQIINYTKSGKKFSNLFHLQPMHDKKGELQYFIGVQLHLKPLRDQLLERMEHESTQLVKAIAENVDRAVRELPDANLKPKNLWAIYCQPVIPRPHKKDNSSWIAIQKITSHGEKIGLHHFKPIKPLGFGDIGSVHLVELKGTRELFAMKAIEKSVILNRNKVHRACMEREIISLLDHPFMPTLYSSFQTPTHIFLIIDFCPGGELFAFLDKQPMKMFKEEAARFYAAEVVIALEYLHCLGIIYRDLKPENILLQKDGHIVLTDFDLSFKTPNFQTIESPTPKKTKRCRHKSLPTFVVEPVVKLNSFIGTEEYIAPEIIMGAGHSSSIDWWTLGVLLYEMLYGRTPFKGKNRKKTFANILFKDLTFPFSIQVSLAAKQLIDALLQRDPARRLGSSTGADEIKRHPFFRQINWPKIRTMTPPSSEVALQLIERDPKANDLKWEDGVLSHSSMSTDIF 914
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4728862 4748862 + Tan0006161.2 Tan02g0526 743152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0526 914 Gene3D Phosphorylase Kinase; domain 1 578 662 - -
Tan02g0526 914 Pfam PAS domain 404 494 IPR000014 -
Tan02g0526 914 Pfam PAS domain 154 248 IPR000014 -
Tan02g0526 914 SUPERFAMILY PYP-like sensor domain (PAS domain) 155 246 IPR035965 -
Tan02g0526 914 Gene3D PAS domain 147 303 - -
Tan02g0526 914 Gene3D Transferase(Phosphotransferase) domain 1 663 879 - -
Tan02g0526 914 MobiDBLite consensus disorder prediction 58 81 - -
Tan02g0526 914 SUPERFAMILY PYP-like sensor domain (PAS domain) 397 495 IPR035965 -
Tan02g0526 914 SMART pas_2 137 203 IPR000014 -
Tan02g0526 914 SMART pas_2 384 453 IPR000014 -
Tan02g0526 914 ProSiteProfiles PAS repeat profile. 132 205 IPR000014 -
Tan02g0526 914 PANTHER FLIPPASE KINASE 1-RELATED 533 883 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Tan02g0526 914 Gene3D PAS domain 371 531 - -
Tan02g0526 914 NCBIfam PAS domain S-box protein 408 494 IPR000014 -
Tan02g0526 914 NCBIfam PAS domain S-box protein 159 254 IPR000014 -
Tan02g0526 914 CDD PAS 396 498 IPR000014 -
Tan02g0526 914 ProSitePatterns Serine/Threonine protein kinases active-site signature. 700 712 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan02g0526 914 SUPERFAMILY Protein kinase-like (PK-like) 556 888 IPR011009 -
Tan02g0526 914 CDD PAS 159 248 IPR000014 -
Tan02g0526 914 ProSiteProfiles PAC domain profile. 206 260 IPR000700 -
Tan02g0526 914 FunFam Putative LOV domain-containing protein 663 877 - -
Tan02g0526 914 MobiDBLite consensus disorder prediction 1 35 - -
Tan02g0526 914 SMART pac_2 209 251 IPR001610 -
Tan02g0526 914 SMART pac_2 459 501 IPR001610 -
Tan02g0526 914 ProSiteProfiles PAC domain profile. 456 510 IPR000700 -
Tan02g0526 914 Pfam Protein kinase domain 582 865 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g0526 914 ProSiteProfiles Protein kinase domain profile. 579 865 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g0526 914 SMART serkin_6 579 865 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g0526 914 CDD STKc_phototropin_like 577 879 - -
Tan02g0526 914 MobiDBLite consensus disorder prediction 11 29 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0526 Tan-Chr2:4728862 Tan05g1029 Tan-Chr5:8540759 4.20E-289 dispersed
Tan09g1242 Tan-Chr9:64759072 Tan02g0526 Tan-Chr2:4728862 3.30E-19 dispersed
Tan02g0526 Tan-Chr2:4728862 Tan02g0527 Tan-Chr2:4729130 0.00E+00 tandem
Tan04g0666 Tan-Chr4:5690139 Tan02g0526 Tan-Chr2:4728862 2.30E-47 transposed
Tan08g2248 Tan-Chr8:73977320 Tan02g0526 Tan-Chr2:4728862 6.70E-52 transposed
Tan09g2184 Tan-Chr9:71899468 Tan02g0526 Tan-Chr2:4728862 2.00E-56 transposed
Tan02g0526 Tan-Chr2:4728862 Tan05g1028 Tan-Chr5:8540759 4.20E-289 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67189 PF00069 Pkinase 5.90E-62 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0526 K20715 - csv:101213364 1401.34