Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0561 ATGGGTGAGGTTGAAGGGAGAAGGCTTTGCCAGGAGTTTTCAGCTGGGTATTATGGTCTTTGTACTGTTGGAGGAATGCTCAGTGCTGGAACAACCCATCTTGCTATTACACCTTTTGATGTCTTGAAGGTCAATATGCAGGATAATCCAATCAAGTACAATGGCATTTCTTCTGGTTTTTCTATTCTTTGGAGGGAACAAGGTCCTTCATCTCTTTGGAGAGGTTGGTCAGGCAAGTTATTTGGATATGGTGTTCAAGGCGGGTTCAAATTTGGTCTCTATGAGTACTTCAAGAAGTTTTACTCTGATTTGCTGGAAGGCCATAGCAGAAGTTCCATATACTTTCTCAGCAGTGCTTCTGCTCAAGTTTTTGCTGATGTTGCTCTCTGTCCTTTTGAAGCTGTCAAGGTCAGAGTCCAGACACAACCCTATTATGCCAAGGGATTGGCTGATGGGTTTCCAAAGTTATACTACAGTGAAGGTCTTTCAGGTTTCTACAGAGGGCTTTTTCCACTTTGGGGACGAAATCTTCCATTCTCTATGATTATGTTCACAACATTTGAGCATTCAGTAGACTTCATATATCAAAATATCATTCAACGTAGAAAGGAAGATTGCTCGAGAACCCAACAGCTCGGCGTTACATGTTTAGCTGGCTATGCAGCTGGAGCTGTTAGTACTGTTGTCTCAAATCCAGCTGATAACATTATTACCTCTCTTTATAATAAGAAGGCTGATAATATAGTGCAGGCAGTGAAGAACATAGGATTTGGCAATCTATTTACTAGAAGTTTTCCTGTCAGAATTGCAGTTGTTGGTCCTGTTGTTACTTTGCAGTGGTTCTTCTATGACACCATTAAAGTGCTAAGTGGACTGCCAACAAGTGGGGGACTCAACAGGCTGCTGGAAGATGCAAAACTATCAACTTAG 930 41.72 MGEVEGRRLCQEFSAGYYGLCTVGGMLSAGTTHLAITPFDVLKVNMQDNPIKYNGISSGFSILWREQGPSSLWRGWSGKLFGYGVQGGFKFGLYEYFKKFYSDLLEGHSRSSIYFLSSASAQVFADVALCPFEAVKVRVQTQPYYAKGLADGFPKLYYSEGLSGFYRGLFPLWGRNLPFSMIMFTTFEHSVDFIYQNIIQRRKEDCSRTQQLGVTCLAGYAAGAVSTVVSNPADNIITSLYNKKADNIVQAVKNIGFGNLFTRSFPVRIAVVGPVVTLQWFFYDTIKVLSGLPTSGGLNRLLEDAKLST 309
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4968090 4976131 - Tan0021388.1 Tan02g0561 743187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0561 309 Pfam Mitochondrial carrier protein 112 195 IPR018108 -
Tan02g0561 309 Pfam Mitochondrial carrier protein 22 102 IPR018108 -
Tan02g0561 309 Gene3D Mitochondrial carrier domain 20 291 IPR023395 -
Tan02g0561 309 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 9 298 IPR044677 GO:0005315(PANTHER)|GO:0005315(InterPro)|GO:0031305(PANTHER)|GO:0035435(PANTHER)|GO:1990547(InterPro)
Tan02g0561 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 210 289 IPR018108 -
Tan02g0561 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 193 IPR018108 -
Tan02g0561 309 ProSiteProfiles Solute carrier (Solcar) repeat profile. 16 100 IPR018108 -
Tan02g0561 309 FunFam Mitochondrial phosphate carrier protein 1, mitochondrial 19 290 - -
Tan02g0561 309 SUPERFAMILY Mitochondrial carrier 21 285 IPR023395 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0561 Tan-Chr2:4968090 Tan09g2425 Tan-Chr9:73838281 2.80E-83 dispersed
Tan02g0561 Tan-Chr2:4968090 Tan07g0051 Tan-Chr7:2617801 3.90E-85 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0561 K15102 - csv:101219895 578.556