Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0614 ATGATTTTTTTATCACTATTTCTTTTTTTATTGATACACTTATTTAGTAATGGGGCATGTGGATATGGCCCTTTGGCATTTGAATTATCCAATGGCTATGTCGCTGGTGTTGTGCCTTCCCTTTATAAACAGGGAGCTGGATGTGGCGCCTGTTTTCAGGTAAGGTGCAAGAATAGAAGATTTTGCACCAGTGTTGGAACTAAAGTGGTTGTAACAGATCAAAATTACGATAACAGATATGACTTTGTTCTTAGTAAGAAAGCATACTCCGCAATGGCTTTAAAGAATAAAACCAAAGAACTTTTAACTATTGGAACAATTGATGTGGAGTACAAAAGGATACCTTGTAGCTACAGAAATAAGAATTTGTTAATGCGAGTGGAGGAATGGAGCCAAAAGCCATATTACTTGGCCATCAAATTCCTTTACCAAGGTGGTCAAACAGAAATAAAAGCAGTTGAAATAGCTGAGGCTGGTTCATCAGATTGGGAGCCGATGAAGAGAAATTATGGTGCAATTTGGGATACAAACAAACAACTTGAGGGAGCTTTGCAATTGAAGATAACAGTAGCTTTAGGGTACAATGATGAAAACACATATTGGACAAATTACGATCTCCCTGAAGATTGGAAAAATGGAGAAATCTATGATACTAGAATTCAGATCGATGACATTGCTAAAGAAACTTGCCCACGAAACCAATGTGGTGATTTGCCATGGAAATAA 726 37.19 MIFLSLFLFLLIHLFSNGACGYGPLAFELSNGYVAGVVPSLYKQGAGCGACFQVRCKNRRFCTSVGTKVVVTDQNYDNRYDFVLSKKAYSAMALKNKTKELLTIGTIDVEYKRIPCSYRNKNLLMRVEEWSQKPYYLAIKFLYQGGQTEIKAVEIAEAGSSDWEPMKRNYGAIWDTNKQLEGALQLKITVALGYNDENTYWTNYDLPEDWKNGEIYDTRIQIDDIAKETCPRNQCGDLPWK 241
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5511925 5513981 - Tan0017089.1 Tan02g0614 743240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0614 241 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 135 218 IPR007117 -
Tan02g0614 241 SUPERFAMILY Barwin-like endoglucanases 15 120 IPR036908 -
Tan02g0614 241 SUPERFAMILY PHL pollen allergen 121 217 IPR036749 -
Tan02g0614 241 Gene3D - 118 222 IPR036749 -
Tan02g0614 241 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 17 121 IPR007112 -
Tan02g0614 241 Gene3D - 13 117 IPR036908 -
Tan02g0614 241 PANTHER EXPANSIN-B3 17 224 - GO:0009505(PANTHER)|GO:0009506(PANTHER)
Tan02g0614 241 Pfam Expansin C-terminal domain 132 193 IPR007117 -
Tan02g0614 241 Pfam Lytic transglycolase 37 111 IPR009009 -
Tan02g0614 241 PRINTS Expansin/Lol pI family signature 104 120 IPR007118 GO:0005576(InterPro)
Tan02g0614 241 PRINTS Expansin/Lol pI family signature 163 177 IPR007118 GO:0005576(InterPro)
Tan02g0614 241 PRINTS Expansin/Lol pI family signature 38 56 IPR007118 GO:0005576(InterPro)
Tan02g0614 241 PRINTS Expansin/Lol pI family signature 204 218 IPR007118 GO:0005576(InterPro)
Tan02g0614 241 PRINTS Expansin/Lol pI family signature 16 34 IPR007118 GO:0005576(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0614 Tan-Chr2:5511925 Tan09g0709 Tan-Chr9:56770231 3.80E-80 dispersed
Tan02g0613 Tan-Chr2:5476003 Tan02g0614 Tan-Chr2:5511925 5.60E-85 tandem
Tan02g0614 Tan-Chr2:5511925 Tan02g0615 Tan-Chr2:5528380 7.00E-58 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0614 - - - 0.0