Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0632 ATGGAACAACTTAGCCAGAAAGAATCTTCATCATGGAAGAAGCTGGAAGAAGATGGCCAAACCATTGCCGAGATGTGGAAAAACATATTAAGTTTCAGTGAAGTGGCAGCAATAAAATGTGTGATAGAGCTTAAAATCGCTGATATTATTGAAGATTATGGAAGTCCAATGACGCTATCCCAACTATCATCCACTTTGAATTGCTCTTCATCGCTTCTATATCGCATCTTGAGATTCCTCATTCATCGTGGAATTTTTAGAGAAGAAACCATAGATGAAAACTTGATAGGCTATGCCCAAACACCTTTGTCTCGCATGCTCACCACCAAGAGTGACAACAATTTGACTCCCTTGTTTTTGTTGCTCAATAGTCCAACGATGCTTGCAGCATGGCATAACTTGAGTGTGTATGTCAAAAATAGTGCCACTTTCCCATTTAAGGTTGCTCATGGGAAGGACTTTTGGAGTTATGGAGCTCAAAATCCAAAGCACAATACACTATTTAATGAGGCCATGGCTTGTTCAGCTCGGACCATTACTTGTGCAATACTTGAAGGTTGTCCAGATATTTTCAATGGAGTTAGAACTTTGGTCGATGTGGGAGGAGGAAATGGAGCTACGTTGAGCATTTTTCTGAAGACTTGCCCATGGATTCAAGCTATTAATTTTGATCTTCCTCATGTTGTTTCTACTTCACCAGAATGCAAAAATGTGGAGCATGTAGCTGGCAACATGTTCAATTTTGTCCCAAAAGCTGATGTTGCTTTCCTCAAGTGGGTTCTACATGATTGGAATGACGAAGAATGTATTAACATTTTGAAGAATTGCAAGGAAGCGATTCCAAAAGATACAGGAAAGGTGATAATCGTAGATGCAGTAATTAATGAAAAAGAAGAAAACAAATTCTCAGATGTTGGGTTGATGCTTGACCTTGTGATGATGGCTTATACCAACAAAGGTAAGGAAAGAACATTTGAGGAATGGGCATATATTATCAACAAAGCTGGTTTCAGTCGACATACAATTACACCTATTCAAGCTATCCCATCAGTAATTCAATGCTACCCTTGA 1071 39.03 MEQLSQKESSSWKKLEEDGQTIAEMWKNILSFSEVAAIKCVIELKIADIIEDYGSPMTLSQLSSTLNCSSSLLYRILRFLIHRGIFREETIDENLIGYAQTPLSRMLTTKSDNNLTPLFLLLNSPTMLAAWHNLSVYVKNSATFPFKVAHGKDFWSYGAQNPKHNTLFNEAMACSARTITCAILEGCPDIFNGVRTLVDVGGGNGATLSIFLKTCPWIQAINFDLPHVVSTSPECKNVEHVAGNMFNFVPKADVAFLKWVLHDWNDEECINILKNCKEAIPKDTGKVIIVDAVINEKEENKFSDVGLMLDLVMMAYTNKGKERTFEEWAYIINKAGFSRHTITPIQAIPSVIQCYP 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5823879 5826054 + Tan0008242.1 Tan02g0632 743258

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0632 356 Pfam Dimerisation domain 37 80 IPR012967 GO:0046983(InterPro)
Tan02g0632 356 SUPERFAMILY Winged helix DNA-binding domain 16 111 IPR036390 -
Tan02g0632 356 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 26 356 IPR016461 GO:0008168(InterPro)
Tan02g0632 356 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 354 IPR029063 -
Tan02g0632 356 Gene3D Vaccinia Virus protein VP39 109 356 IPR029063 -
Tan02g0632 356 PIRSF O-mtase 2 356 IPR016461 GO:0008168(InterPro)
Tan02g0632 356 PANTHER O-METHYLTRANSFERASE 28 344 IPR016461 GO:0008168(InterPro)|GO:0008171(PANTHER)|GO:0008757(PANTHER)|GO:0019438(PANTHER)|GO:0032259(PANTHER)
Tan02g0632 356 Pfam O-methyltransferase domain 131 338 IPR001077 GO:0008171(InterPro)
Tan02g0632 356 Gene3D - 7 107 IPR036388 -
Tan02g0632 356 FunFam O-methyltransferase family protein 109 355 - -
Tan02g0632 356 CDD AdoMet_MTases 196 294 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0632 K22588 - - csv:101222999 501.13
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0628 Tan-Chr2:5702890 Tan02g0632 Tan-Chr2:5823879 2.20E-161 dispersed
Tan02g0629 Tan-Chr2:5731453 Tan02g0632 Tan-Chr2:5823879 2.20E-118 dispersed
Tan02g0630 Tan-Chr2:5758904 Tan02g0632 Tan-Chr2:5823879 1.20E-151 dispersed
Tan02g0632 Tan-Chr2:5823879 Tan05g0792 Tan-Chr5:5766960 3.40E-77 dispersed
Tan02g0631 Tan-Chr2:5786262 Tan02g0632 Tan-Chr2:5823879 1.60E-125 tandem
Tan02g0632 Tan-Chr2:5823879 Tan02g0633 Tan-Chr2:5834624 1.20E-141 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g226 . . . . . . . . Cmo19g00776 Cmo11g01762 . . . . . Cpe04g00615 . Bhi05g01656 Tan02g0632 . . . . . . . . . . . . Cone12ag1254 Cone8ag1309 . . . Csa07g00140 . Cme01g01207 . . . . . . . Bma08g00585 . . . . Cma19g00763 . . . . . . . . . . . . . . . . . . Lsi11g01240 . Chy01g00646 Cme11g01172
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000315 1 12 0 1 0 8 0 7 7 3 4 6 4 5 8 8 6 2 2 8 4 3 2 4 5 10 6 5 7 2 140