Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0640 ATGCTCTGCAGATATGCTCTCGACGTAAATGTGGAGAGGGCAGAAGATGTTCTCATGCATAAAAGATTATTGCAATTTGCTCACGATCCTGCAAATCGACCTGCAATTGAAGTTCGCCTAGTGCAGGTCCAAGCCATTTATGATGAAAATTCAGCTGATTTTGCTGATTCATATCCTGTAAAAGACACTGATCATAATTCTGCAAATTTCTTGATTCGACAGAGCATACATCCACCACCTGCCTTTGGGTCATCTCCTAACCTTGAAGCCCTCGCCCTTGAAGCTAATATTGCTCAGGATCAGGAGGTCGATCATTCTGTACATGCCAGAACACAATTTTTCCGGCCGATGCATGAAATAACCTTCTCTACAGATGACAAGCCAAAACTTCTCAGTCAGTTGACTTCCTTGCTTGCGGAGATTGGACTGAACATCCAGGAGGCACATGCATTTTCCACTGTTGACGGTTACTCCTTGGACGTTTTTGTAGTTGATGGTTGGCCCTATGAGGAAACAGAGCGATTGAAGACTGCATTAGAGAAGGAAGTCTTACAGAGGCAGGCTTGGCCAAATCATAAATCATCGTCTTCTGTAGGGGAACGGGATATATCAATTAAATCTGAACCTGATCGGGTGGAAATACCCACGGATGGGACTGATGTATGGGAAATTAATCCTAGACATCTGAAGTTTGAGCATAAAGTTGCATCTGGTTCATATGGAGATCTGTATAAAGGTACATACTGCAGTCAGGAAGTGGCTATTAAAGTCCTTAAACCTGAACGCGTAAATTCAGATATGCAAAGTGAGTTTGCCCAGGAAGTATACATTATGAGAAAAGTAAGGCATAAGAATGTCGTACAGTTTATAGGTGCATGCACTAAGCCTCCAAGCTTGTGCATTGTTACAGAATTTATGTCTGGTGGTAGTGTCTATGACTATCTACATAAACAAAAGGGCACTTTTAGGCTTCCATCCTTGCTCAAGGTAGCCATTGATGTCTCCAAGGGAATGAACTATTTGCACCAAAATAATATCATTCACAGAGATCTAAAGGCCGCCAATCTTCTGATGGATGAAAATGAAGTTGTCAAGGTTGCTGATTTCGGTGTTGCCAGAGTGAAAGCTCAATCAGGGGTTATGACTGCAGAAACTGGGACATATCGGTGGATGGCTCCTGAGGTTATTGAGCACAAACCCTATGATCACAAGGCTGATGTTTTCAGTTTCGGAATTGTCTTGTGGGAGCTGCTAACTGGAAAGCTACCCTATGAATTTCTAACCCCATTACAAGCTGCGGTTGGAGTGGTACAAAAGGGTTTACGGCCTACTATTCCAAAGCACACTAATCCGAAGCTGGCTGAGTTGCTGGAAAAATGTTGGCAGCAAGACCCGTCGTGCAGGCCTGACTTCTCTGAAATTATCGATATATTGCTGCAGATAACCAAGGAAGTTGCAGAAGATGGCGACGAACGAAGAAAGGAGAAGAGTGGAGGATTCCTTTCTGTGTTGAGACGAAACCATCACTGA 1530 43.4 MLCRYALDVNVERAEDVLMHKRLLQFAHDPANRPAIEVRLVQVQAIYDENSADFADSYPVKDTDHNSANFLIRQSIHPPPAFGSSPNLEALALEANIAQDQEVDHSVHARTQFFRPMHEITFSTDDKPKLLSQLTSLLAEIGLNIQEAHAFSTVDGYSLDVFVVDGWPYEETERLKTALEKEVLQRQAWPNHKSSSSVGERDISIKSEPDRVEIPTDGTDVWEINPRHLKFEHKVASGSYGDLYKGTYCSQEVAIKVLKPERVNSDMQSEFAQEVYIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKQKGTFRLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEFLTPLQAAVGVVQKGLRPTIPKHTNPKLAELLEKCWQQDPSCRPDFSEIIDILLQITKEVAEDGDERRKEKSGGFLSVLRRNHH 509
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5896324 5904915 + Tan0020140.1 Tan02g0640 743266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0640 509 SUPERFAMILY Protein kinase-like (PK-like) 211 478 IPR011009 -
Tan02g0640 509 CDD ACT_TyrKc 117 184 - -
Tan02g0640 509 PRINTS Tyrosine kinase catalytic domain signature 449 471 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan02g0640 509 PRINTS Tyrosine kinase catalytic domain signature 303 316 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan02g0640 509 PRINTS Tyrosine kinase catalytic domain signature 340 358 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan02g0640 509 PRINTS Tyrosine kinase catalytic domain signature 405 427 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan02g0640 509 PRINTS Tyrosine kinase catalytic domain signature 386 396 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan02g0640 509 Pfam Protein tyrosine and serine/threonine kinase 229 477 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan02g0640 509 FunFam Serine/threonine-protein kinase isoform 1 219 307 - -
Tan02g0640 509 CDD STKc_MAP3K-like 235 478 - -
Tan02g0640 509 PANTHER SERINE-THREONINE PROTEIN KINASE 121 480 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Tan02g0640 509 Gene3D Transferase(Phosphotransferase) domain 1 308 501 - -
Tan02g0640 509 ProSitePatterns Serine/Threonine protein kinases active-site signature. 346 358 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan02g0640 509 ProSiteProfiles Protein kinase domain profile. 229 479 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g0640 509 FunFam serine/threonine-protein kinase HT1 308 498 - -
Tan02g0640 509 ProSiteProfiles ACT domain profile. 119 196 IPR002912 -
Tan02g0640 509 SMART serkin_6 229 479 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g0640 509 Gene3D Phosphorylase Kinase; domain 1 219 307 - -
Tan02g0640 509 SUPERFAMILY ACT-like 117 181 IPR045865 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0640 Tan-Chr2:5896324 Tan11g1153 Tan-Chr11:9196209 2.40E-132 dispersed
Tan11g0659 Tan-Chr11:5787079 Tan02g0640 Tan-Chr2:5896324 2.10E-39 dispersed
Tan02g0640 Tan-Chr2:5896324 Tan02g0641 Tan-Chr2:5896324 1.20E-298 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67199 PF07714 PK_Tyr_Ser-Thr 5.60E-75 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0640 - - - 0.0