Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0641 ATGGTAATGGAGGATAACGAGAGCTGTGGAAGTAGAGCGTACGACTCCTTGTCGCCGGCGCAGAGTCGGCAACAGAGGCAGAAGTTTGAGGTCTATAACGAGGTTCTACGGCGTCTGAAGGATTCCAACAACGAGGAGGCCATTCAGCCTGGTTTTGACGACGAACTATGGCTTCACTTCAATCGCCTTCCTACTCGATATGCTCTCGACGTAAATGTGGAGAGGGCAGAAGATGTTCTCATGCATAAAAGATTATTGCAATTTGCTCACGATCCTGCAAATCGACCTGCAATTGAAGTTCGCCTAGTGCAGGTCCAAGCCATTTATGATGAAAATTCAGCTGATTTTGCTGATTCATATCCTGTAAAAGACACTGATCATAATTCTGCAAATTTCTTGATTCGACAGAGCATACATCCACCACCTGCCTTTGGGTCATCTCCTAACCTTGAAGCCCTCGCCCTTGAAGCTAATATTGCTCAGGATCAGGAGGTCGATCATTCTGTACATGCCAGAACACAATTTTTCCGGCCGATGCATGAAATAACCTTCTCTACAGATGACAAGCCAAAACTTCTCAGTCAGTTGACTTCCTTGCTTGCGGAGATTGGACTGAACATCCAGGAGGCACATGCATTTTCCACTGTTGACGGTTACTCCTTGGACGTTTTTGTAGTTGATGGTTGGCCCTATGAGGAAACAGAGCGATTGAAGACTGCATTAGAGAAGGAAGTCTTACAGAGGCAGGCTTGGCCAAATCATAAATCATCGTCTTCTGTAGGGGAACGGGATATATCAATTAAATCTGAACCTGATCGGGTGGAAATACCCACGGATGGGACTGATGTATGGGAAATTAATCCTAGACATCTGAAGTTTGAGCATAAAGTTGCATCTGGTTCATATGGAGATCTGTATAAAGGTACATACTGCAGTCAGGAAGTGGCTATTAAAGTCCTTAAACCTGAACGCGTAAATTCAGATATGCAAAGTGAGTTTGCCCAGGAAGTATACATTATGAGAAAAGTAAGGCATAAGAATGTCGTACAGTTTATAGGTGCATGCACTAAGCCTCCAAGCTTGTGCATTGTTACAGAATTTATGTCTGGTGGTAGTGTCTATGACTATCTACATAAACAAAAGGGCACTTTTAGGCTTCCATCCTTGCTCAAGGTAGCCATTGATGTCTCCAAGGGAATGAACTATTTGCACCAAAATAATATCATTCACAGAGATCTAAAGGCCGCCAATCTTCTGATGGATGAAAATGAAGTTGTCAAGGTTGCTGATTTCGGTGTTGCCAGAGTGAAAGCTCAATCAGGGGTTATGACTGCAGAAACTGGGACATATCGGTGGATGGCTCCTGAGGTTATTGAGCACAAACCCTATGATCACAAGGCTGATGTTTTCAGTTTCGGAATTGTCTTGTGGGAGCTGCTAACTGGAAAGCTACCCTATGAATTTCTAACCCCATTACAAGCTGCGGTTGGAGTGGTACAAAAGGGTTTACGGCCTACTATTCCAAAGCACACTAATCCGAAGCTGGCTGAGTTGCTGGAAAAATGTTGGCAGCAAGACCCGTCGTGCAGGCCTGACTTCTCTGAAATTATCGATATATTGCTGCAGATAACCAAGGAAGTTGCAGAAGATGGCGACGAACGAAGAAAGGAGAAGAGTGGAGGATTCCTTTCTGTGTTGAGACGAAACCATCACTGA 1716 44.35 MVMEDNESCGSRAYDSLSPAQSRQQRQKFEVYNEVLRRLKDSNNEEAIQPGFDDELWLHFNRLPTRYALDVNVERAEDVLMHKRLLQFAHDPANRPAIEVRLVQVQAIYDENSADFADSYPVKDTDHNSANFLIRQSIHPPPAFGSSPNLEALALEANIAQDQEVDHSVHARTQFFRPMHEITFSTDDKPKLLSQLTSLLAEIGLNIQEAHAFSTVDGYSLDVFVVDGWPYEETERLKTALEKEVLQRQAWPNHKSSSSVGERDISIKSEPDRVEIPTDGTDVWEINPRHLKFEHKVASGSYGDLYKGTYCSQEVAIKVLKPERVNSDMQSEFAQEVYIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKQKGTFRLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEFLTPLQAAVGVVQKGLRPTIPKHTNPKLAELLEKCWQQDPSCRPDFSEIIDILLQITKEVAEDGDERRKEKSGGFLSVLRRNHH 571
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5896324 5904915 + Tan0020140.2 Tan02g0641 743267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0641 571 PANTHER SERINE-THREONINE PROTEIN KINASE 27 542 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Tan02g0641 571 CDD ACT_TyrKc 179 246 - -
Tan02g0641 571 Pfam Protein tyrosine and serine/threonine kinase 291 539 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan02g0641 571 PRINTS Tyrosine kinase catalytic domain signature 511 533 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan02g0641 571 PRINTS Tyrosine kinase catalytic domain signature 467 489 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan02g0641 571 PRINTS Tyrosine kinase catalytic domain signature 402 420 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan02g0641 571 PRINTS Tyrosine kinase catalytic domain signature 365 378 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan02g0641 571 PRINTS Tyrosine kinase catalytic domain signature 448 458 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan02g0641 571 SUPERFAMILY Protein kinase-like (PK-like) 273 540 IPR011009 -
Tan02g0641 571 ProSitePatterns Serine/Threonine protein kinases active-site signature. 408 420 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan02g0641 571 Gene3D Phosphorylase Kinase; domain 1 281 369 - -
Tan02g0641 571 Gene3D Transferase(Phosphotransferase) domain 1 370 563 - -
Tan02g0641 571 CDD STKc_MAP3K-like 297 540 - -
Tan02g0641 571 FunFam serine/threonine-protein kinase HT1 370 560 - -
Tan02g0641 571 SUPERFAMILY ACT-like 179 243 IPR045865 -
Tan02g0641 571 ProSiteProfiles Protein kinase domain profile. 291 541 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g0641 571 SMART serkin_6 291 541 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g0641 571 MobiDBLite consensus disorder prediction 1 22 - -
Tan02g0641 571 ProSiteProfiles ACT domain profile. 181 258 IPR002912 -
Tan02g0641 571 FunFam Serine/threonine-protein kinase isoform 1 281 369 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g2353 Tan-Chr1:28329619 Tan02g0641 Tan-Chr2:5896324 5.50E-226 dispersed
Tan01g5061 Tan-Chr1:116150886 Tan02g0641 Tan-Chr2:5896324 5.00E-191 dispersed
Tan02g0641 Tan-Chr2:5896324 Tan11g1153 Tan-Chr11:9196209 3.20E-141 dispersed
Tan02g0640 Tan-Chr2:5896324 Tan02g0641 Tan-Chr2:5896324 1.20E-298 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67200 PF07714 PK_Tyr_Ser-Thr 7.40E-75 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0641 - - - 0.0