Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0659 ATGTTATCGGAGTTGATGAACTTTTTGAGGGCCTGTTTTCGGCCAAGCTCTGATCGGTATGTGGCGGGAGATATCAGGGGGCGGCAGGACGGGTTGTTGTGGTACAAAGACAGTGGACAACACTTGAATGGTGAGTTCTCAATGTCTGTGGTTCAGGCTAACAATTTGCTTGAAGATCAGAGCCAGATTGAGTCAGGCAGTTTGAGCTCAGATGAGTCTGGTCCCAGAGGGACATTTGTTGGTGTGTATGATGGCCATGGAGGCCCTGAGACTTCTCGGTATATCTGTGATCATCTCTTCCAGCATCTCAAGAGATTTACTTCTGAGCAAGATACAATGTCTGCCGATGTAATACGCAAGGCATTCCAAGCGACAGAAGAGGGGTTTTTTTCTGTAGTCCGAAGACAAAGGTCAACAAATCCACAAATTGCAGCTGTTGGTTCATGCTGTCTAGTTGGTGTAATCTGTAATGGGACTCTCTATGTTGCAAATCTAGGTGATTCTCGTGCTGTTTTGGGTAGAGTAGTGAAGGCAACTGGCGAGGTTCTAGCCATTCAGTTATCAACAGAGCACAATGTGTCTAACGAGTCCGTGAGGCAAGAGCTGCAATCTTTGCACCCTGAAGACTCACAAGTTGTGGTTTTAAAGCATAACGTTTGGCGAGTAAAGGGCATAATACAGATTTCCAGATCTATAGGTGATGTGTACTTGAAAAAGGCCGAATTCAATAGAGAACCTCTATATTTAAAGTTTCGAGTTCGGGAACCCTTCAAAAAGCCAATTTTGAGCTCTGAACCAGCCATTTCTGAGACCCAGTTGAAGCCAGATGATCAATTTATCATATTTGCATCAGATGGGTTGTGGGAGCAACTTAGCAATCAGGAAGCAGTCGATATAGTTCACAAGCATTCTCGAAGTGGAAGTGCAAGAAGACTGGTCAAAGCTGCTCTTCAAGTAGCTGCAAAGAAGAGAGAAATGAGGTACTCAGATTTGAAGAAGATTGACCGTGGTGTTCGTCGCCATTTCCACGACGACATCACTGTGGTGGTTGTGTTTCTCGACACAAATCTGCTCTTCAGAGCCAGCTCCACGAAGAGCCCGAGTGTCTCACTACGAGGGGGCGGAGTCAACCGGCTTCCTAACTCTTTAGCGCCCGTCACTACGCCCATGTAG 1173 46.21 MLSELMNFLRACFRPSSDRYVAGDIRGRQDGLLWYKDSGQHLNGEFSMSVVQANNLLEDQSQIESGSLSSDESGPRGTFVGVYDGHGGPETSRYICDHLFQHLKRFTSEQDTMSADVIRKAFQATEEGFFSVVRRQRSTNPQIAAVGSCCLVGVICNGTLYVANLGDSRAVLGRVVKATGEVLAIQLSTEHNVSNESVRQELQSLHPEDSQVVVLKHNVWRVKGIIQISRSIGDVYLKKAEFNREPLYLKFRVREPFKKPILSSEPAISETQLKPDDQFIIFASDGLWEQLSNQEAVDIVHKHSRSGSARRLVKAALQVAAKKREMRYSDLKKIDRGVRRHFHDDITVVVVFLDTNLLFRASSTKSPSVSLRGGGVNRLPNSLAPVTTPM 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6074965 6078546 - Tan0005188.1 Tan02g0659 743285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0659 390 FunFam Phosphatase 2C family protein 34 363 - -
Tan02g0659 390 ProSitePatterns PPM-type phosphatase domain signature. 79 87 IPR000222 GO:0043169(InterPro)
Tan02g0659 390 CDD PP2Cc 46 353 IPR001932 -
Tan02g0659 390 ProSiteProfiles PPM-type phosphatase domain profile. 45 353 IPR001932 -
Tan02g0659 390 Pfam Protein phosphatase 2C 65 320 IPR001932 -
Tan02g0659 390 PANTHER PROTEIN PHOSPHATASE 37 352 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Tan02g0659 390 SMART PP2C_4 37 351 IPR001932 -
Tan02g0659 390 Gene3D - 33 360 IPR036457 -
Tan02g0659 390 SUPERFAMILY PP2C-like 49 354 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0659 Tan-Chr2:6074965 Tan05g1112 Tan-Chr5:9942096 1.00E-183 dispersed
Tan02g0659 Tan-Chr2:6074965 Tan05g1111 Tan-Chr5:9942096 1.00E-183 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0659 - - - 0.0