Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0684 ATGGACGACGGGGAGCTTGATTGTTCGAATCAAGAAGTGTTTTCGAGCCCTAATATGGACCTTCCAAGCAGCTGCTCAATGGATAGCTTCTTTGATGATCTTCTCAAGGACACTCATACTTGTACTCATACTCACACTTGCAATCCGCCGGGCCCTGATTACTCTCATACCCACACCTGTTTTCATGTCCACACTAAAATTGTCCCTGCCCCAACTGAAGAAGACAAGGTTGTTACTGATGACACTGCAGAATCGACTGAGAAGAAGTCGAAGAAACGCCCGTTGGGTAACCGGGAAGCTGTTCGTAAGTATCGTGAGAAGAAGAAGGCTAGGGCAGCCTCATTAGAGGATGAGGTTGTTAGATTGAGGGCTTTGAATCAGCATTTGATGAAGAGGTTGCAAGGGCAGGCAGCACTGGAGGCTGAGATTGCTAGGCTCAAGTGTTTGCTTGTGGATATTAGGGGCAGAATTGAAGGGGAGATTGGTTCTTTCCCCTACCAGAAAGCTGTTAATCCTAACCTGTCCAACCCAAGCATCCCCGGTGCTTATGTGATGAACCCTTGTAACATGCAGTGTGAGGATCAGGTTTACTGCCTCCATCCTGGGATTGATGGCAGTAGAAGCGGCGAAGGTGCTGTGATAAATGGACAGGGCTTTGGTGCTTGTGAATTTGAAAATCTTCAGTGTTTGGCAAATCATGACTCGGGATCAAAAGAGCTACCTGGATGTGGAATAGGGAGCGCGGTTTTGAATGATATTTCTTCAGGAGCAACAAAGAGAAAAGGTGAAATCTGA 795 46.92 MDDGELDCSNQEVFSSPNMDLPSSCSMDSFFDDLLKDTHTCTHTHTCNPPGPDYSHTHTCFHVHTKIVPAPTEEDKVVTDDTAESTEKKSKKRPLGNREAVRKYREKKKARAASLEDEVVRLRALNQHLMKRLQGQAALEAEIARLKCLLVDIRGRIEGEIGSFPYQKAVNPNLSNPSIPGAYVMNPCNMQCEDQVYCLHPGIDGSRSGEGAVINGQGFGACEFENLQCLANHDSGSKELPGCGIGSAVLNDISSGATKRKGEI 264
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6407378 6410387 - Tan0017279.2 Tan02g0684 743310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0684 264 SUPERFAMILY Leucine zipper domain 89 135 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g0684 264 SMART brlzneu 85 152 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g0684 264 Gene3D - 75 153 - -
Tan02g0684 264 Pfam Basic region leucine zipper 86 142 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g0684 264 Coils Coil 98 132 - -
Tan02g0684 264 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 87 134 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g0684 264 CDD bZIP 91 144 - -
Tan02g0684 264 MobiDBLite consensus disorder prediction 72 103 - -
Tan02g0684 264 PANTHER CCAAT/ENHANCER BINDING PROTEIN 1 182 IPR031106 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0006357(PANTHER)
Tan02g0684 264 MobiDBLite consensus disorder prediction 72 107 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0684 Tan-Chr2:6407378 Tan02g0686 Tan-Chr2:6407378 2.00E-127 dispersed
Tan02g0683 Tan-Chr2:6407378 Tan02g0684 Tan-Chr2:6407378 3.60E-127 tandem
Tan02g0684 Tan-Chr2:6407378 Tan02g0685 Tan-Chr2:6407378 1.40E-128 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
26704 PF07716 bZIP_2 8.40E-14 CL0018 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0684 K25785 - csv:101208161 486.493