Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0702 ATGGAAAATGGGGTTGAGATTGTTGATGGCTTGCACGATGGAGAGAGGAAATTTGTGGAAGATGGTGTTTCGCGGGATAGGGTAGATGAAACAATTGTATTTGGTTCTCATGAATCTAAGGATACGGAAGGGGAAGATGTTTTTGAGGAGGCATTAGATGGGAAAGAGCATTTGATAGAGCAGAGTCCGAAATATGGTTCGGCATACGGTGATGTTGCGGAAGAAGAAATCGGCTATTTTGCATCTGGGGCAACTTCTGACCATCCTAACGGTGCTCACGATGAAGAGAAGTTTGAAGAGACAACAGAGGCTTCCTGTGGAGTGAATGAAAACACGGTGGTGGAGGATCAAGATGTGAATTCTGAAAAGGAAATGGAAGACTTGGGTGGGAAATTGGCTGACAATGCAGTTGTGGCTTCTAAAGTTGATGAGAGAGGAATTGAAGAGGAAGCAGTGGCTTCTGATTTGAATGAGAGGAAGGATAATGAGTTGGGTTTCAGTGGAGATGATTCAGGAAAGGAAACATTGGAGAACGGTGCTAGCCCAGAGGTTGAAGTGTTGAAGGGTGGGGATCAGGATGATTTGAAATATGGCTCGGCCAGTATGAAGTCTGAAAATGAAGACAGTGACAATTTGAATGTGACTTTGCCTTCAGATGACGAATTGGTGGATAAGAGTGCTGATATGGTAGGGGGGACTAACTTGGATTCTACTAGCGAGATTCATACTGAAAATGGCGATGGTGTGGAATTGAAGGAGAAGAGCTTAGGTACGGAGTCTACAGACCATGATGGGAAGACTGAGGAGCCATTAAATGCACCCGCTGTCCTTGATTTGGACAATCAAGATAATACGAATGGCGAGCTAAGGGATGATTCTCTTCATGTGGATCTAGGACTGCCAGACAATGAGAATGAAGAAATAAAAAAGGCTACAGATGGTATTGATCCTAAGAACGAGGATAATAAAGATGAAGAAAGTTCTTCAACCTGCGTGGTTACCACAAATCAGGACCACATGATTGAGGAAATGAAAGATGCTTCTACTGGGAAAGACTCAGAAGAGCAGTCTACAGAATCTCGTGAATTGAATGGTACTACTTCTGGTATTGATCCTAAGAACGAGGATGATAAAGATGAAGAAAGCTCTTCAACCTGCGTGACTACCACAAATCAGGACCACAGGATTGAAGAAGTGAAAGATGCTTCTACTGGGAGAGACTCAGAAGAGCAGTGTACAGAATCTCGTGAATTGAATGGTACTACTTCTGCTGACAAACATAAACCTGTGGGTGAAAATGAAAATTCTCTGGAGACAGTTAAGGATATCTCAGCCTCTGAAAAGATAGCAGATGAGAATATTGAGAAGATCCAAGGCAGTGAAAGTGATGTGACTGTGAAGGAAAACAATGCGTCTGGACGTCAGCATCCTGCTGGTGGTTCCAATAATGGCCCCGACATTGGAGGGCTTGAAAAGACAGAGAGCAGAGATAAGGTTGGACAGGACAAAACTCAAGTGAACAGGGATCCAGAAATTCAACCTGCATCAATCATTGCTTCATCATCTGGAAAATCTACAAATCCCACTCCTCCTGCCCGTCCAGCAGGTCTTGGGCGTGCTGCTCCATTATTGGAACCTGCCCCTCGGGTGGTGCAGCCACCTCGAGTAAATGGTACTGTATCCCATGTTCAAATGCAACAAATTGATGATCCTGTTAATGGGGATGCTGAGGAAAATGATGATACTCGTGAGCAACTCCAGATGATAAGAGTGAAATTTTTGCGTCTTGCACATAGGCTTGGGCAAACTCCACACAATGTTGTTGTGGCACAAGTTCTATACCGTCTGGGACTAGCTGAGCAACTTCGAGGAAGAAATGGAGGTCGGGTTGGTGCCTTTAGCTTTGACCGTGCCAGTGCCATGGCAGAGCAGCTGGAGGCAGCTGGGCAGGAACCACTTGATTTCTCATGTACGATCATGGTTCTTGGAAAGACAGGTGTGGGTAAAAGTGCTACCATCAACTCCATATTTGACGAAGTTAAATTCAGTACTGATGCTTTTCAAATGGGCACAAAAAAGGTTCAAGATGTCGTGGGAACTGTGCAGGGGATCAAAGTACGAGTCATTGACACTCCAGGCCTTCTTTCTTCTTGGTCAGACCAGCGCCAAAATGAGAAGATCCTTCTCTCTGTTAAGCGCTTTATAAAGAAGACTCCACCAGATATTGTTTTGTATCTTGATAGGCTGGATATGCAAAGCCGGGATTTCAGTGACATGCCTCTCTTGCGTACAATTACTGAAATATTTGGACCTTCAATATGGTTCAATGCAATTGTGGTTCTTACTCATGCAGCTTCTGCTCCACCTGATGGTCCAAATGGTACTGCTTCTAGTTATGATATGTTTGTCACTCAGCGATCTCATGTTGTACAGCAAGCTATACGCCAGGCTGCAGGGGATATGCGCCTTATGAATCCGGTCGCATTAGTGGAGAATCACTCTGCTTGCAGAACAAACAGAGCTGGGCAAAGGGTATTGCCAAATGGTCAGGTTTGGAAACCTCATTTGTTATTGCTCTCATTTGCGTCAAAGATTTTGGCCGAAGCTAACACTCTTTTGAAGTTGCAAGATAGTCCACCTGGAAGGCCATTTGCTCCTCGGTCGAAGTCACCTCCTTTACCCTTCCTTCTCTCCTCCCTTCTTCAATCCAGACCTCAAGTGAAACTGCCAGAAGAACAGTTTGCTGATGATGATGGTCTTGAGGATGACCTTGATGAATCGTCAGATTCTGAAAATGAATCTGAATATGATGAATTGCCACCTTTTAAAAGATTGACAAAAGCCCAGGTGGCAAAGCTCTCCAAAGCACAGAAGAAGGCCTACTTTGACGAGTTGGAATACAGGGAAAAACTTTTTATGAAGAAGCAACTGAGAGAAGAGAAGAGGAGAAGAAAGATGATGAAGAAAATGGCTGCTGAGGCAAAAGATCAACCCAGCGACTATAGTGAAAATGTTGAAGAAGATAGTGGAGCTGCTGCATCTGTTCCAGTTCCCATGCCTGATTTGGCATTACCTGCTTCCTTTGATTCTGATAATCCCACTCACCGGTATCGTTATCTTGATTCCTCTAACCAGTGGCTGATAAGGCCTGTACTCGAAACACATGGATGGGATCATGATGTTGGTTATGAAGGGATAAATGCCGAGAAGTTGTTTGTCGTCAAAGACACAATACCCATCTCTTTTAGTGGTCAAGTTACAAAGGATAAGAAGGATGCAAATGTTCAAATAGAGATGACCAGTTCGATAAAGCATGGGGAAACTAAATCATCTTCCATTGGTTTTGATATGCAGACTGTTGGGAAGGATTTGGCCTATACACTACGTGGTGAGACGACGTTTCTTAATTTTAGGAAGAACAAGGCCATTGCTGGTCTATCAGTTGCTCTATTAGGTGACGCCTTATCTGCAGGATTCAAAGTTGAGGACAAATTGATTGCTAATAAGCGATTTCGTTTAGTTGTGACTGGGGGTGCAATGACCGGTAGGGGAGATATAGCTTATGGTGGCAGCCTGGAGGCTCAATTGAGAGATAAAGACTATCCCTTGGGTCGTTCACTTTCAACTCTTGGGCTTTCGGTCATGGATTGGCACGGAGATCTTGCTATTGGTTGCAATGTACAATCTCAAGTCCCCGTTGGGCGATCTACAAACCTGATTGCTCGTGTGAATTTGAATAACAGGGGGGCTGGGCAAGTCAGCTTTCGGTTAAACAGCTCAGAACAGCTTCAGATGGCCATCATTGGTCTCCTTCCTCTCGTCAGAAAACTTCTGGGTAGTTATCAATACTGGCAGCATGGACAATGA 3867 44.32 MENGVEIVDGLHDGERKFVEDGVSRDRVDETIVFGSHESKDTEGEDVFEEALDGKEHLIEQSPKYGSAYGDVAEEEIGYFASGATSDHPNGAHDEEKFEETTEASCGVNENTVVEDQDVNSEKEMEDLGGKLADNAVVASKVDERGIEEEAVASDLNERKDNELGFSGDDSGKETLENGASPEVEVLKGGDQDDLKYGSASMKSENEDSDNLNVTLPSDDELVDKSADMVGGTNLDSTSEIHTENGDGVELKEKSLGTESTDHDGKTEEPLNAPAVLDLDNQDNTNGELRDDSLHVDLGLPDNENEEIKKATDGIDPKNEDNKDEESSSTCVVTTNQDHMIEEMKDASTGKDSEEQSTESRELNGTTSGIDPKNEDDKDEESSSTCVTTTNQDHRIEEVKDASTGRDSEEQCTESRELNGTTSADKHKPVGENENSLETVKDISASEKIADENIEKIQGSESDVTVKENNASGRQHPAGGSNNGPDIGGLEKTESRDKVGQDKTQVNRDPEIQPASIIASSSGKSTNPTPPARPAGLGRAAPLLEPAPRVVQPPRVNGTVSHVQMQQIDDPVNGDAEENDDTREQLQMIRVKFLRLAHRLGQTPHNVVVAQVLYRLGLAEQLRGRNGGRVGAFSFDRASAMAEQLEAAGQEPLDFSCTIMVLGKTGVGKSATINSIFDEVKFSTDAFQMGTKKVQDVVGTVQGIKVRVIDTPGLLSSWSDQRQNEKILLSVKRFIKKTPPDIVLYLDRLDMQSRDFSDMPLLRTITEIFGPSIWFNAIVVLTHAASAPPDGPNGTASSYDMFVTQRSHVVQQAIRQAAGDMRLMNPVALVENHSACRTNRAGQRVLPNGQVWKPHLLLLSFASKILAEANTLLKLQDSPPGRPFAPRSKSPPLPFLLSSLLQSRPQVKLPEEQFADDDGLEDDLDESSDSENESEYDELPPFKRLTKAQVAKLSKAQKKAYFDELEYREKLFMKKQLREEKRRRKMMKKMAAEAKDQPSDYSENVEEDSGAAASVPVPMPDLALPASFDSDNPTHRYRYLDSSNQWLIRPVLETHGWDHDVGYEGINAEKLFVVKDTIPISFSGQVTKDKKDANVQIEMTSSIKHGETKSSSIGFDMQTVGKDLAYTLRGETTFLNFRKNKAIAGLSVALLGDALSAGFKVEDKLIANKRFRLVVTGGAMTGRGDIAYGGSLEAQLRDKDYPLGRSLSTLGLSVMDWHGDLAIGCNVQSQVPVGRSTNLIARVNLNNRGAGQVSFRLNSSEQLQMAIIGLLPLVRKLLGSYQYWQHGQ 1288
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6581603 6587341 + Tan0017687.2 Tan02g0702 743328

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0702 1288 MobiDBLite consensus disorder prediction 983 1016 - -
Tan02g0702 1288 Pfam Translocase of chloroplast 159/132, membrane anchor domain 1015 1278 IPR024283 -
Tan02g0702 1288 MobiDBLite consensus disorder prediction 141 170 - -
Tan02g0702 1288 MobiDBLite consensus disorder prediction 915 935 - -
Tan02g0702 1288 CDD Toc34_like 629 874 - -
Tan02g0702 1288 PANTHER GTPASE, IMAP FAMILY MEMBER-RELATED 655 1221 IPR045058 GO:0009707(PANTHER)|GO:0045036(PANTHER)
Tan02g0702 1288 MobiDBLite consensus disorder prediction 506 529 - -
Tan02g0702 1288 MobiDBLite consensus disorder prediction 986 1002 - -
Tan02g0702 1288 MobiDBLite consensus disorder prediction 490 505 - -
Tan02g0702 1288 MobiDBLite consensus disorder prediction 89 103 - -
Tan02g0702 1288 ProSiteProfiles AIG1-type G domain profile. 654 883 IPR006703 GO:0005525(InterPro)
Tan02g0702 1288 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 650 791 IPR027417 -
Tan02g0702 1288 MobiDBLite consensus disorder prediction 243 269 - -
Tan02g0702 1288 MobiDBLite consensus disorder prediction 187 203 - -
Tan02g0702 1288 Gene3D - 626 874 IPR027417 -
Tan02g0702 1288 NCBIfam chloroplast protein import component Toc86/159, G and M domains 533 1281 IPR005690 GO:0003924(InterPro)|GO:0005525(InterPro)|GO:0009707(InterPro)|GO:0045036(InterPro)
Tan02g0702 1288 MobiDBLite consensus disorder prediction 339 359 - -
Tan02g0702 1288 MobiDBLite consensus disorder prediction 116 130 - -
Tan02g0702 1288 MobiDBLite consensus disorder prediction 444 462 - -
Tan02g0702 1288 Pfam AIG1 family 657 815 IPR006703 GO:0005525(InterPro)
Tan02g0702 1288 MobiDBLite consensus disorder prediction 911 941 - -
Tan02g0702 1288 MobiDBLite consensus disorder prediction 82 539 - -
Tan02g0702 1288 MobiDBLite consensus disorder prediction 284 327 - -
Tan02g0702 1288 MobiDBLite consensus disorder prediction 463 479 - -
Tan02g0702 1288 MobiDBLite consensus disorder prediction 393 435 - -
Tan02g0702 1288 Coils Coil 977 997 - -
Tan02g0702 1288 FunFam Translocase of chloroplast 120, chloroplastic 629 876 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0702 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0702 Tan-Chr2:6581603 Tan04g2212 Tan-Chr4:79286701 5.80E-191 dispersed
Tan02g0701 Tan-Chr2:6581603 Tan02g0702 Tan-Chr2:6581603 0.00E+00 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g129 . . . . . Bpe12g00112 . . Cmo19g00737 . . . . . Sed08g0469 . Cpe15g00583 Bhi05g01734 Tan02g0702 Cmetu06g1183 . Hepe02g0438 . . Cla02g00439 Cam02g0448 Cec02g0446 Cco02g0466 Clacu02g0450 Cmu02g0444 Cre02g0778 Cone2ag0203 Cone16ag0840 . . . Csa07g00087 . Cme01g01277 Blo04g00558 Blo13g00521 . Bda14g00607 Bpe15g00822 . Bma03g00599 Bma08g00616 . . . Cma11g01385 Cma19g00728 . Car19g00558 . . . . . . . . . . . . . . . . Lsi11g01187 . Chy01g00691 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005811 1 1 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 1 2 1 39