Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0728 ATGTGGCTACAGAAAGGACACAGCGTTAATGGCGGGAAAAAGGGAGGAGCGGCAGGAGGAGGAAATGGGTTGGTGGCGATTGGCATTGACAGGGAAAAAGGAAGCCAAAATGCTCTCCGATGGGCCGCCGAGCATTTGCTCGGAAAGGGCCAAACCGTGATTTTAATCCATGTGGTTCATAGACCTTCCAGTGCGGCTGCTTCTTTGATTGGGGAAGCCATTATTTGTAATGGCGATAACAATTCCACGGCTGATTCCCCTCGTAAAGAGAAGCTCGAGATGCAAACTAGAGACATTTTTCTCACCTTCCATTGCTATTGTACTCGAAAGGATATTCAATGCCTTGATGTTATATTGGAGGATACTGATGTGGTGAAAGCATTAACGGAATACGTCTCGTATGCTGCAATCGACAACTTAGTGCTTGGGGCTCCATCGAAACATGGATTTATTAGGTTTAAGACGTCGAGCATGGGGAGTAGTGTGTCAAAAGGGGCACCGGATTTCTGCAATGTATATGTCATCTCGAAGGGGAAGGTGTCGTCGGTGAAACATGCTACTCGCTCAACTCCCTTTACTTCCCCTCTACTAGACCATATTCAGAAGTTATCTAAGCCGGTTTCAAAGGGATCGGCCACTCCTCCACATAAGTTTAATTTAAGAGATAGGACATCATTCAAGCCTCGCAGTTATCATGATGAATCGATCAAGTCACCTTTTTCTCATGGAGGTGGAGGGTTCTCTGAGTCAGAATCCGATATATCCTTCATAAGCTCTGGCAGACCGAGCACGGAGCGCACTTCTTCTGTTGCATTTGACTACTCTGATTCAGGCCCCCCACGATTTTCTACCAGCTCAGAGCAAAGCTTTGTATCTCTACCATTTAAACCAAAATGGACAGACCTCAATAATCTCAATGATTTCTCATCAGTTTCAGATGAGAGCTGCAGGACATCATGTTCCTGGTCATCTCAGAACTTGGATGAAGCAGAACTTGAAATGAGGAGGCTAAAGCAAGAGCTTAGACAAACTATGGAAATGTACAGTGCAGCATGTAAAGAAGCACTAACAGCAAAGCAGAAGGCAATGGAACTACATAATTGGAGACGTGAAGAAGAACAAAAACTCGAAGATGCACGACTCGCACAAGAAGAAGCAATGGCTGTTGCAGAGCAGGAGAGAGTGAGATGCCGAGCCGCAATGGAAGCAGCTGATGCAGCTAAGAGAATTGCAGAGTTTGAATCACATAAAAGAGCAAGTCTAGAGATGAAATCACTTAGAGAAGCAGAGGAAATGCAGAGAGCACTGAAAAATCTTGCACAGAGTGACATCAGATACAGGAGATATACAATTGAGGAGATTGAATCAGCAACAGAACATTTTGCACAATCTCGAAAGATTGGGGAAGGAGGTTATGGACCTGTCTTTGGTTGTCGTCTCGATCACACATCGGTTGCAGTCAAGGTTTTGCGTCCCGATGCGACTCAGGGAAGGTCACAGTTCCAGCAAGAGATTGATATATTGAGTTGCATAAGGCATCCCAACATGGTGCTTCTTCTAGGAGCATGCCCAGAATATGGCATTCTAGTGTACGAGCACATGTCCAACGGAAGTTTAGAGGATCGACTCTTCCGAAAGGGGAACACCCCTGTTATTCCTTGGCAATATAGGTTTCGAATTGCTGCCGAGATTGCTACTGGCCTTTTGTTTCTCCACCAGACAAAGCCAGAGCCATTGGTGCACCGTGACCTCAAGCCAGCTAACATATTGCTAGACCACAACTATGTTAGCAAGATAAGCGACGTTGGTTTGGCTAGACTTGTACCTGCTGTTGCCGAAAATGTAACACAATGCTACATGACTTCAGCCGCCGGAACTTTCTGCTATATAGACCCAGAGTATCAACAAACTGGAATGCTTGGTGTAAAATCTGATGTGTATTCACTAGGTATCCTGTTGCTTCAACTACTTACCGCCAAGCCGCCCATGGGGTTGGCTCACCATGTTGCTCGTTCTATTGAGAAGGGGACTTTTGGGGGGTTTCTGGACCCAGCTGTGGCTGATTGGCCAGTGGAACAGGCACTTTGCTTAGCAAAATTAGCACTTCAATGTGCAGAACTTAGACGAAAAGACAGACCAGATCTTGGCAATGTTTTGTTGCCAGAACTTGACAAATTGAGAGAATTTGGTGAGGAGAAAATGGAGCACATGGTGTCAAGTGGTAGTAGTGGATCTTTGAGTGGTTTTAGCCATGCCTCAATGGAGCAGGATATAATGAGCGACCCGCTTCTAATGATGACTTCAGAAAGTTGCAAGAGCCAATCTAGTGGATTATCACAAGTAGGAGGAAAATGA 2355 45.48 MWLQKGHSVNGGKKGGAAGGGNGLVAIGIDREKGSQNALRWAAEHLLGKGQTVILIHVVHRPSSAAASLIGEAIICNGDNNSTADSPRKEKLEMQTRDIFLTFHCYCTRKDIQCLDVILEDTDVVKALTEYVSYAAIDNLVLGAPSKHGFIRFKTSSMGSSVSKGAPDFCNVYVISKGKVSSVKHATRSTPFTSPLLDHIQKLSKPVSKGSATPPHKFNLRDRTSFKPRSYHDESIKSPFSHGGGGFSESESDISFISSGRPSTERTSSVAFDYSDSGPPRFSTSSEQSFVSLPFKPKWTDLNNLNDFSSVSDESCRTSCSWSSQNLDEAELEMRRLKQELRQTMEMYSAACKEALTAKQKAMELHNWRREEEQKLEDARLAQEEAMAVAEQERVRCRAAMEAADAAKRIAEFESHKRASLEMKSLREAEEMQRALKNLAQSDIRYRRYTIEEIESATEHFAQSRKIGEGGYGPVFGCRLDHTSVAVKVLRPDATQGRSQFQQEIDILSCIRHPNMVLLLGACPEYGILVYEHMSNGSLEDRLFRKGNTPVIPWQYRFRIAAEIATGLLFLHQTKPEPLVHRDLKPANILLDHNYVSKISDVGLARLVPAVAENVTQCYMTSAAGTFCYIDPEYQQTGMLGVKSDVYSLGILLLQLLTAKPPMGLAHHVARSIEKGTFGGFLDPAVADWPVEQALCLAKLALQCAELRRKDRPDLGNVLLPELDKLREFGEEKMEHMVSSGSSGSLSGFSHASMEQDIMSDPLLMMTSESCKSQSSGLSQVGGK 784
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6800927 6804661 + Tan0019511.1 Tan02g0728 743354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0728 784 ProSiteProfiles Protein kinase domain profile. 461 723 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g0728 784 PANTHER OS02G0152300 PROTEIN 25 765 IPR051348 -
Tan02g0728 784 Gene3D Phosphorylase Kinase; domain 1 439 533 - -
Tan02g0728 784 MobiDBLite consensus disorder prediction 251 269 - -
Tan02g0728 784 MobiDBLite consensus disorder prediction 205 224 - -
Tan02g0728 784 Gene3D HUPs 24 177 IPR014729 -
Tan02g0728 784 Coils Coil 320 354 - -
Tan02g0728 784 ProSitePatterns Serine/Threonine protein kinases active-site signature. 579 591 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan02g0728 784 Pfam Protein kinase domain 462 664 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g0728 784 SMART serkin_6 461 723 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g0728 784 FunFam U-box domain-containing protein 51 534 733 - -
Tan02g0728 784 CDD STK_N 24 178 - -
Tan02g0728 784 Coils Coil 365 393 - -
Tan02g0728 784 Pfam Universal stress protein family 26 167 IPR006016 -
Tan02g0728 784 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 433 533 - -
Tan02g0728 784 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 26 175 - -
Tan02g0728 784 MobiDBLite consensus disorder prediction 230 269 - -
Tan02g0728 784 SUPERFAMILY Protein kinase-like (PK-like) 443 719 IPR011009 -
Tan02g0728 784 Gene3D Transferase(Phosphotransferase) domain 1 534 742 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3753 Tan-Chr1:102332318 Tan02g0728 Tan-Chr2:6800927 1.40E-218 dispersed
Tan02g0728 Tan-Chr2:6800927 Tan08g0926 Tan-Chr8:13186541 1.60E-196 dispersed
Tan02g0728 Tan-Chr2:6800927 Tan02g2609 Tan-Chr2:94674540 4.10E-232 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67201 PF00069 Pkinase 6.40E-39 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0728 - - - 0.0