Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan02g0737 | ATGTCTTCCGCCGGAATCGCAAAATCCAACAACATCCGCCGCATCGTAAGCATCCGCCAGATGCTCCAGCGCTGGCGCAAGAAGGCTCGCGTCACCGCCTCCTCTCGCGGCGCCGGCGCCGTCGTTGATGCTCCGTCGGATGTTCCGGCCGGCCACGTCGCCGTCTGCGTCGGAAGCAGTTGCAGAAGGTTCATCGTCCGCGCTACGTACTTGAACCATCCGATCTTCAAGAAGCTTCTGCTGCAAGCCGAAGAGGAGTACGGATTTGCGAACCAAGGTCCTCTTGCGATTCCTTGTGACGAGTCGGTTTTCGAGGAGGTTCTTCGGACCGTTTCCCGGTCTGACTCGGGCCGGTTCATGAATCTGCAGGAGTTTCGCCGCCGGTGCCACGTCGACTCCCGGAATAGTCTTCTCCGTGAATCTCGGCCGTTGCTTTTTGATTTCGCCGATAAATCGGTCTGTTAG | 465 | 58.49 | MSSAGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRGAGAVVDAPSDVPAGHVAVCVGSSCRRFIVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVLRTVSRSDSGRFMNLQEFRRRCHVDSRNSLLRESRPLLFDFADKSVC | 154 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 6895292 | 6895967 | - | Tan0015592.1 | Tan02g0737 | 743363 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan02g0737 | 154 | Pfam | Auxin responsive protein | 18 | 110 | IPR003676 | GO:0009733(InterPro) | |
| Tan02g0737 | 154 | PANTHER | AUXIN-INDUCED PROTEIN-LIKE-RELATED | 19 | 110 | IPR003676 | GO:0009733(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan01g4998 | Tan-Chr1:115725605 | Tan02g0737 | Tan-Chr2:6895292 | 1.10E-51 | dispersed | |
| Tan02g0737 | Tan-Chr2:6895292 | Tan05g1225 | Tan-Chr5:12188271 | 1.50E-45 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan02g0737 | K14488 | - | csv:101203091 | 263.848 |