Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0743 ATGGGTGATACTGAAGATGCTCATACTGATAACATACGAAATCTTCAATGTTCATTTGGAACATCTCCTTCTTCTGCTGTGAAGCATCATTTCTCTATGGATCAACTTAAAATTTCTCAAATGAACTGCTCACAAGGCCGTCCACAGCATTTTCAGTCGAATTTTCTTGGAGATAACAATAGAAGAATTGGGATTCCGCCTTGTCCCAACTCACCGCAGATCCCACCAATCTCACCGTATTCTCAGATTCCGATCTCGCGTCCGATGAATCAGCAAAATTATAGCCCAGTTCATACTCATTCTCGATCGTTATCGCAGCCTTCTTTTTTCTCTTTCGATTCTTTGCCCCCTTTAAGCCCGTCTCCATTTCGTGACTCCCCATCTACATCGAATTCAGATCAGGTTTCTGCAGACACATCAATGGAGGATAGGGATGCCAGTTCACATTCTTTGTTGCCTCCCTCACCTTATATGAGGGCCAATTCTTCTAAGATGGGAGATGCTTTACCCCCTCGTAAAGCCCATAGGCGGTCTAATAGTGATATTCCATTTGGATTATCTTCGATGATTCAGTCATCTTCTCTTCTTCCTTTAAGTGGCTCAGGTGGATTGGAGCGATCAATGAGTAGTAAAGAGAATGCGGGCATATTTAAGCCGGCCGGCCAGTTTGTTAAAAGAGAACATAGTTTGGAGAAAAGCATTGATAACAATTTGGAAGGAATGGGTGAAAGGAAGTCCGAAGGGGACACTGTGGATGATTTGTTCTCTGCTTATATGAATTTGGATAATATTGATTTGTTCAACTCCTCAGGGACCAACGACAAGAATGGTCATGAGAATCGGGAGGATTTGGATAGTAGAGGTAGTGGAACAAAGACAGGGGGCGACAGCAGTGATAATGAAGCAGAAAGCAGTGTAAATGAGAGTGGGGATAACACTCAAATGGCTGGATTGAATTCCTCTGCTGAGAAGAGGGAAGGGATCAAACGGACTGCGGGGGAAGATATTGCTCCAACTACCAGACATTTCCGGAGTGTCTCCATGGATAGTTTCATGGGGAAGTTGCAGTTTGGTGATGAATCGCCCAAAATGCCTCCTACACCACCTGGCATTCGTCCGGGGCAACTTTCTTCAAACAACCTAGTTGACGGTAATTCAACTCCGTTCAGCTTGGAGTTTGGTAATGGTGAGTTCAGTGGGGCTGAACTGAAGAAAATTATGGCAAATGACAAACTTGCTGAGATTGCACTAACCGATCCCAAGCGTGCAAAGAGGATCTTGGCGAACCGTCAGTCTGCTGCTCGATCAAAAGAACGAAAGATGCGGTATATATCTGAGTTGGAACACAAGGTTCAGACTCTTCAGACAGAAGCTACCACGCTGTCTGCCCAACTCACACTTTTACAGCGAGACTCCGTTGGACTTACAAACCAGAATAATGAGCTGAAGTTCCGTCTTCAAGCCATGGAACAGCAAGCACAACTACGGGATGCTCTAAATGAAGCCTTAACGGCGGAGGTACAGCGATTGAAGCTCGCTACAACTGAGATAAACGCGCAGTCTCATCCCTCGAACGGGGTAATGTCTCAACCTTCTATGAATCGCCATGGACTCCAGCTTCAGCTTCAGCAGCAGCAGCACCAACAACAACAGCAACAGATGCAGCAGAATGGCAATGCAACCACAAAACCAGAGTCCAACAAATAA 1707 45.28 MGDTEDAHTDNIRNLQCSFGTSPSSAVKHHFSMDQLKISQMNCSQGRPQHFQSNFLGDNNRRIGIPPCPNSPQIPPISPYSQIPISRPMNQQNYSPVHTHSRSLSQPSFFSFDSLPPLSPSPFRDSPSTSNSDQVSADTSMEDRDASSHSLLPPSPYMRANSSKMGDALPPRKAHRRSNSDIPFGLSSMIQSSSLLPLSGSGGLERSMSSKENAGIFKPAGQFVKREHSLEKSIDNNLEGMGERKSEGDTVDDLFSAYMNLDNIDLFNSSGTNDKNGHENREDLDSRGSGTKTGGDSSDNEAESSVNESGDNTQMAGLNSSAEKREGIKRTAGEDIAPTTRHFRSVSMDSFMGKLQFGDESPKMPPTPPGIRPGQLSSNNLVDGNSTPFSLEFGNGEFSGAELKKIMANDKLAEIALTDPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLTNQNNELKFRLQAMEQQAQLRDALNEALTAEVQRLKLATTEINAQSHPSNGVMSQPSMNRHGLQLQLQQQQHQQQQQQMQQNGNATTKPESNK 568
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6982572 6987640 - Tan0010254.1 Tan02g0743 743369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0743 568 SMART brlzneu 417 481 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g0743 568 Coils Coil 437 492 - -
Tan02g0743 568 CDD bZIP_plant_RF2 422 471 IPR044759 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g0743 568 SUPERFAMILY Leucine zipper domain 421 472 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g0743 568 MobiDBLite consensus disorder prediction 83 102 - -
Tan02g0743 568 MobiDBLite consensus disorder prediction 45 102 - -
Tan02g0743 568 MobiDBLite consensus disorder prediction 290 320 - -
Tan02g0743 568 MobiDBLite consensus disorder prediction 268 345 - -
Tan02g0743 568 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 159 556 - GO:0003700(PANTHER)|GO:0005634(PANTHER)
Tan02g0743 568 Coils Coil 500 520 - -
Tan02g0743 568 FunFam probable transcription factor PosF21 420 473 - -
Tan02g0743 568 MobiDBLite consensus disorder prediction 323 337 - -
Tan02g0743 568 Pfam bZIP transcription factor 421 475 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g0743 568 MobiDBLite consensus disorder prediction 115 186 - -
Tan02g0743 568 MobiDBLite consensus disorder prediction 45 59 - -
Tan02g0743 568 Gene3D - 420 472 - -
Tan02g0743 568 MobiDBLite consensus disorder prediction 358 381 - -
Tan02g0743 568 MobiDBLite consensus disorder prediction 517 568 - -
Tan02g0743 568 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 419 482 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g0743 568 MobiDBLite consensus disorder prediction 275 289 - -
Tan02g0743 568 MobiDBLite consensus disorder prediction 68 82 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0743 Tan-Chr2:6982572 Tan10g1202 Tan-Chr10:12104647 4.10E-40 dispersed
Tan02g0740 Tan-Chr2:6960732 Tan02g0743 Tan-Chr2:6982572 7.50E-260 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
26711 PF00170 bZIP_1 9.90E-09 CL0018 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0743 - - - 0.0