Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0764 ATGAAGATCCGTTGCGATGTTTGTGATCAAGCTGAGGCCTCTGTTTTTTGCTCTGCTGATGAAGCCGCTCTTTGTCATGGCTGCGATCTCCATGTTCACCGCGCTAACAAGCTCGCTGGAAAGCACTCGAGATTCTCCCTACTTCAACCGATCAAAACGGAATCTCCTCTTTGCGATATTTGTCAGGAACGGCGCGCGCTCGTATTTTGTCAACAAGATAGGGCAATTCTTTGCAGAGAATGCGACATTTCGATTCACGAAGCGAACGAACATACGCAGAAGCACAGTCGATTTCTTCTCACAGGTGTGAAGCTTTCTTCGACTTGTTTTTCGTACCAAACATCTTCGTCCTCCAATGGCTACGATGCCGCCATGGATGTTAAAACTGGAAGCTCCCACGCTTGCAGCAAGAGGCCTAAAATGGCCGCGAACGAAATCTTGAGCTCTCACTCCGCTGAAAAAGCTGCTCCGTCGACAAGTAATTACAAGGTCGAGGACGGCCAAGCAAGCGACGGCGGTTCACTCTCGACGAGCAGCATATCGGAATATTTGGAGACATTGCCGGGATGGTGCGTGGAGGAGTTTCTCGATCCTTCCACCGCCGCTGCCAATCGTTTCTTTTAA 624 49.84 MKIRCDVCDQAEASVFCSADEAALCHGCDLHVHRANKLAGKHSRFSLLQPIKTESPLCDICQERRALVFCQQDRAILCRECDISIHEANEHTQKHSRFLLTGVKLSSTCFSYQTSSSSNGYDAAMDVKTGSSHACSKRPKMAANEILSSHSAEKAAPSTSNYKVEDGQASDGGSLSTSSISEYLETLPGWCVEEFLDPSTAAANRFF 207
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7230661 7232770 - Tan0008363.1 Tan02g0764 743390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0764 207 Pfam B-box zinc finger 54 92 IPR000315 GO:0008270(InterPro)
Tan02g0764 207 Pfam B-box zinc finger 3 46 IPR000315 GO:0008270(InterPro)
Tan02g0764 207 FunFam B-box zinc finger protein 21 1 98 - -
Tan02g0764 207 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270(InterPro)
Tan02g0764 207 MobiDBLite consensus disorder prediction 151 175 - -
Tan02g0764 207 SMART bboxneu5 53 100 IPR000315 GO:0008270(InterPro)
Tan02g0764 207 SMART bboxneu5 4 47 IPR000315 GO:0008270(InterPro)
Tan02g0764 207 CDD Bbox1_BBX-like 5 47 IPR049808 -
Tan02g0764 207 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270(InterPro)
Tan02g0764 207 CDD Bbox1_BBX-like 57 100 IPR049808 -
Tan02g0764 207 Gene3D Classic Zinc Finger 1 99 - -
Tan02g0764 207 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 199 IPR051979 GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0009640(PANTHER)
Tan02g0764 207 MobiDBLite consensus disorder prediction 149 175 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4984 Tan-Chr1:115611905 Tan02g0764 Tan-Chr2:7230661 1.40E-13 dispersed
Tan02g0764 Tan-Chr2:7230661 Tan06g1564 Tan-Chr6:24504335 2.00E-29 dispersed
Tan02g0764 Tan-Chr2:7230661 Tan02g2035 Tan-Chr2:89736909 1.00E-49 wgd
Tan02g0764 Tan-Chr2:7230661 Tan05g1250 Tan-Chr5:13163052 4.30E-64 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
26714 PF00643 zf-B_box 3.40E-07 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0764 - - - 0.0