Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0773 ATGAGAGTTGTGGGGTTTTGTTTTTCTTCTTCTTTTGCTGTGTTTTTTGCTGTTTTTGTTCTGTTTTTGAATGGAGTGGAGGTCTGTAATGGTGGTAAAACAAGCCGGTTTTTGAGGAAGGTTGAGAAAACTGTGGATATGCCTCTTGACAGTGATGTTTTTGCTGTGCCTTCTGGTTATAATGCTCCCCAGCAGGTTCATATCACACAAGGAGATCATGAAGGAAAGGCAGTGATTGTTTCATGGGTCACTCCAAATAAACCAGGATCAAATAAAGTATTATATTGGAGTGAGAAAAGCAAGCAAAAGAAACAGGCATTTGGGAAAGTATATACTTACAAGTTCTACAATTACACTTCAGGCTACATCCACCACTGCTCCATTACAAACTTAAAGTACAACACCAAATACTACTATGAAGTTGGAATTGGGTACTCTCCAAGAACATTCTGGTTTGTCACTCCTCCAGAAGTCGGTCCCGATGTCCCCTATACATTTGGTCTCATAGGGGATCTTGGCCAGAGTTTTGATTCAAATATAACGCTGACACATTATGAACGAAACCCGCATAAAGGAAAAGCAGTGTTGTTTGTGGGGGATCTATCTTATGCTGACAACTATCCATTTCATGACAATGTAAGATGGGATACATGGGGAAGATTCACAGAGAGAAGCACTGCCTATCAGCCTTGGATATGGACTGCAGGAAATCATGAAATTGATTTTGTTCCAGAAATTGGTGAGACCAAGCCTTTCAAGCCATATACTAACCGTTATCACGTCCCTTATAAAGCATCCGAGAGCACAGCTCCTTTTTGGTACTCAATCAAGAGAGGTCCTGCATACGTCATAGTCTTGGCTTCCTATTCAGCCTATGGTAAATACACTCCTCAATACAAATGGCTGGAAGCGGAGTTCCCAAAAGTCAACAGAAGCGAAACACCATGGTTGATTGTTCTGATGCATTCCCCATGGTACAACAGCTACAACTACCATTACATGGAAGGAGAAACTATGCGAGTGATGTATGAGCCGTGGTTTGTAAAGTACAAAGTCGACGTCGTCTTTGCTGGCCACGTCCATGCCTATGAAAGATCTGAAAGGATTTCAAATATTGCATACAACATCGTGAATGGTCTTTGTGTTCCTGTGAAAGATCAATCTGCACCTGTATACATTACAATAGGTGATGGAGGAAACCTTGAAGGCCTAGCAAACAATATGACGGAGCCACAGCCTACGTACTCGGCGTATCGTGAAGCAAGCTTTGGCCATGCCATATTCGATATAAAGAACCGAACTCATGCATATTTCAGTTGGAACAGGAATCAAGATGGATACGCAGTTGAAGCTGACTCTCTTTGGTTTTTCAACCGACACTGGTTCCCGGTTGACGAGTCGTTGAGTGATCAGAAATGA 1419 42.14 MRVVGFCFSSSFAVFFAVFVLFLNGVEVCNGGKTSRFLRKVEKTVDMPLDSDVFAVPSGYNAPQQVHITQGDHEGKAVIVSWVTPNKPGSNKVLYWSEKSKQKKQAFGKVYTYKFYNYTSGYIHHCSITNLKYNTKYYYEVGIGYSPRTFWFVTPPEVGPDVPYTFGLIGDLGQSFDSNITLTHYERNPHKGKAVLFVGDLSYADNYPFHDNVRWDTWGRFTERSTAYQPWIWTAGNHEIDFVPEIGETKPFKPYTNRYHVPYKASESTAPFWYSIKRGPAYVIVLASYSAYGKYTPQYKWLEAEFPKVNRSETPWLIVLMHSPWYNSYNYHYMEGETMRVMYEPWFVKYKVDVVFAGHVHAYERSERISNIAYNIVNGLCVPVKDQSAPVYITIGDGGNLEGLANNMTEPQPTYSAYREASFGHAIFDIKNRTHAYFSWNRNQDGYAVEADSLWFFNRHWFPVDESLSDQK 472
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7368207 7371682 + Tan0008371.1 Tan02g0773 743399

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0773 472 Gene3D - 159 468 IPR029052 -
Tan02g0773 472 SUPERFAMILY Purple acid phosphatase, N-terminal domain 44 156 IPR008963 GO:0003993(InterPro)|GO:0046872(InterPro)
Tan02g0773 472 CDD MPP_PAPs 160 458 IPR041792 -
Tan02g0773 472 SUPERFAMILY Metallo-dependent phosphatases 160 466 IPR029052 -
Tan02g0773 472 Pfam Calcineurin-like phosphoesterase 165 363 IPR004843 GO:0016787(InterPro)
Tan02g0773 472 PANTHER ACID PHOSPHATASE RELATED 16 459 IPR039331 GO:0003993(InterPro)
Tan02g0773 472 FunFam Fe(3+)-Zn(2+) purple acid phosphatase 62 158 - -
Tan02g0773 472 Pfam Purple acid Phosphatase, N-terminal domain 63 152 IPR015914 GO:0003993(InterPro)|GO:0046872(InterPro)
Tan02g0773 472 Pfam Iron/zinc purple acid phosphatase-like protein C 389 448 IPR025733 -
Tan02g0773 472 Gene3D - 62 158 - -
Tan02g0773 472 FunFam Fe(3+)-Zn(2+) purple acid phosphatase 159 467 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0773 K22390 - - csv:101211612 909.442
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0773 Tan-Chr2:7368207 Tan03g2040 Tan-Chr3:75380056 8.00E-191 dispersed
Tan10g0557 Tan-Chr10:4493611 Tan02g0773 Tan-Chr2:7368207 1.00E-62 transposed
Tan10g0578 Tan-Chr10:4706294 Tan02g0773 Tan-Chr2:7368207 6.00E-63 transposed
Tan02g0773 Tan-Chr2:7368207 Tan02g2021 Tan-Chr2:89447452 2.70E-199 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1026 . . . . . . . . . . . . . . Sed04g3913 . . Bhi04g00213 Tan02g0773 Cmetu01g2623 . Hepe02g0485 . . Cla08g01452 Cam08g1937 Cec08g1511 Cco08g1650 Clacu08g1627 . Cre08g1413 . . . . . . . . Blo17g00768 . . . . . . Bma05g00144 . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000712 2 3 4 4 1 3 4 3 3 3 3 3 3 3 3 3 3 5 4 3 4 3 3 3 3 3 3 4 3 5 97