Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan02g0908 | ATGGAGATTCTCTCTGTTACTCTGTACTTAACAATATTACTCCTCTTTGTTTCTGTTTTTTTCTTTTCCTTCAAGAGAAATGAAAGGCAAAAATCCCAAAAATCTCTAAGGCTTCCTCCTGGTTCCATGGGATTGCCATGGATTGGAGAAACTTTGCAACTCTATTCTCAAGACCCCAACTTATTTTTCTCAGAAAAACAGAGAAGATATGGAGAAATTTTTAAGACCAATATTTTGGGATGTCCTTGTGTGATGTTGGCCAGCGCCGCCGCAGCCCGGTTCGTTCTGGTGACTAACGCCCATTTGTTCCGGCCGACTTACCCCAAAAGCAAAGAGACGATGATCGGCCCGGCAGCGCTTTTCTTCCACCAGGGAAATTACCATTCTAGCCTCCGGAAGCTTGTTCAAAACTCTCTCTCGCTTGAACGCCTCAGAATCCTTGTTCCTCCTATTGTAGCCGCCGCCATTTCCGCCGCCGACTCCTGGGCCTCCGCCGGCCACGTCATCAACACCTTCCTCGCAATGAAAAAGTTTTCTTTCGAGGTGGGAATTCTAGCAGTGTTTGGCAAACTAGAAAATCACTACAGCGAGAAGCTAAAAGAAAACTATTGCATATTAGACAAAGGCTACAACTCTTTTCCAACCCGATTACCAGGAACAGCATATTCAAAAGCATTATCAGCGAGGAAGAAGCTGAGGGAGATTCTGGGAGAGATAATAATGGAGAGGAGAGAAAAAAGAGTAACAGAGAGAGATTTTTTGGGTCATCTTTTGAACTTCAGAGATGATCAAAATGGTGAAACTTTAACTGAGGATCAGATCGCCGACAACATCATCGGAGTTCTGTTTGCGGCGCAGGACACCACCGCCAGTGTGCTGACGTGGATTCTTAAGTATCTTCATGATAATTTGAAGCTCTTTCAGGCTGTCAGGGCAGAACAAATGGAGATTTATAGAAGAAATGGAGAGGGGAAGATGCCTCTGTCTTGGGCTCAGATTAAGGACATGCCCTTTACTCATAGGGTTGTATTAGAGAGCTTGAGGATGGCTAGCATCATATCTTTCACTTTTAGGGAGGCAGTGGTTGATGTGGAATATAAAGGGTACCTAATACCAAAGGGTTGGAAGGTCATGCCCTTGTTCAGGAATATTCATCACAACCCTGACTACTTCTCTGACCCTCAAATCTTTGATCCCTCTAGATTTGAGGTGGCTCCAAGGCCCAATACATTCATGCCATTTGGCAATGGAGTACACTCTTGCCCTGGGAATGAACTTGCCAAGCTGGAGATCCTCATCTTACTTCATCACCTCATTACCAAATTTAGGTGGGAAGTTGTGGGATCACAAAGCGGGGTTCAATATGGGCCATTCCCAGTGCCTGTCGACGGGCTACCGGCCAGATTTTTCAAACAAACAGCAACCAACCAATAG | 1434 | 45.12 | MEILSVTLYLTILLLFVSVFFFSFKRNERQKSQKSLRLPPGSMGLPWIGETLQLYSQDPNLFFSEKQRRYGEIFKTNILGCPCVMLASAAAARFVLVTNAHLFRPTYPKSKETMIGPAALFFHQGNYHSSLRKLVQNSLSLERLRILVPPIVAAAISAADSWASAGHVINTFLAMKKFSFEVGILAVFGKLENHYSEKLKENYCILDKGYNSFPTRLPGTAYSKALSARKKLREILGEIIMERREKRVTERDFLGHLLNFRDDQNGETLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNLKLFQAVRAEQMEIYRRNGEGKMPLSWAQIKDMPFTHRVVLESLRMASIISFTFREAVVDVEYKGYLIPKGWKVMPLFRNIHHNPDYFSDPQIFDPSRFEVAPRPNTFMPFGNGVHSCPGNELAKLEILILLHHLITKFRWEVVGSQSGVQYGPFPVPVDGLPARFFKQTATNQ | 477 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 10378617 | 10383938 | - | Tan0004622.1 | Tan02g0908 | 743534 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan02g0908 | 477 | PANTHER | CYTOCHROME P450 26 | 37 | 449 | - | GO:0004497(PANTHER)|GO:0010295(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER) | |
| Tan02g0908 | 477 | SUPERFAMILY | Cytochrome P450 | 32 | 470 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g0908 | 477 | Pfam | Cytochrome P450 | 39 | 447 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g0908 | 477 | CDD | CYP90-like | 67 | 468 | - | - | |
| Tan02g0908 | 477 | PRINTS | E-class P450 group I signature | 273 | 290 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g0908 | 477 | PRINTS | E-class P450 group I signature | 380 | 404 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g0908 | 477 | PRINTS | E-class P450 group I signature | 421 | 444 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g0908 | 477 | PRINTS | E-class P450 group I signature | 67 | 86 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g0908 | 477 | PRINTS | E-class P450 group I signature | 340 | 358 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g0908 | 477 | PRINTS | E-class P450 group I signature | 411 | 421 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g0908 | 477 | PRINTS | P450 superfamily signature | 421 | 432 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g0908 | 477 | PRINTS | P450 superfamily signature | 412 | 421 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g0908 | 477 | PRINTS | P450 superfamily signature | 341 | 352 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g0908 | 477 | PRINTS | P450 superfamily signature | 284 | 301 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g0908 | 477 | FunFam | Abscisic acid 8 | 28 | 471 | - | - | |
| Tan02g0908 | 477 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 414 | 423 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Tan02g0908 | 477 | Gene3D | Cytochrome P450 | 27 | 471 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan01g4795 | Tan-Chr1:113861907 | Tan02g0908 | Tan-Chr2:10378617 | 3.80E-188 | dispersed | |
| Tan02g0908 | Tan-Chr2:10378617 | Tan02g0911 | Tan-Chr2:10379204 | 5.50E-256 | dispersed | |
| Tan02g0908 | Tan-Chr2:10378617 | Tan02g0909 | Tan-Chr2:10378617 | 1.70E-228 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan02g0908 | K09843 | - | csv:101219389 | 815.453 |