Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan02g0909 | ATGTTGGCCAGCGCCGCCGCAGCCCGGTTCGTTCTGGTGACTAACGCCCATTTGTTCCGGCCGACTTACCCCAAAAGCAAAGAGACGATGATCGGCCCGGCAGCGCTTTTCTTCCACCAGGGAAATTACCATTCTAGCCTCCGGAAGCTTGTTCAAAACTCTCTCTCGCTTGAACGCCTCAGAATCCTTGTTCCTCCTATTGTAGCCGCCGCCATTTCCGCCGCCGACTCCTGGGCCTCCGCCGGCCACGTCATCAACACCTTCCTCGCAATGAAAAAGTTTTCTTTCGAGGTGGGAATTCTAGCAGTGTTTGGCAAACTAGAAAATCACTACAGCGAGAAGCTAAAAGAAAACTATTGCATATTAGACAAAGGCTACAACTCTTTTCCAACCCGATTACCAGGAACAGCATATTCAAAAGCATTATCAGCGAGGAAGAAGCTGAGGGAGATTCTGGGAGAGATAATAATGGAGAGGAGAGAAAAAAGAGTAACAGAGAGAGATTTTTTGGGTCATCTTTTGAACTTCAGAGATGATCAAAATGGTGAAACTTTAACTGAGGATCAGATCGCCGACAACATCATCGGAGTTCTGTTTGCGGCGCAGGACACCACCGCCAGTGTGCTGACGTGGATTCTTAAGTATCTTCATGATAATTTGAAGCTCTTTCAGGCTGTCAGGGCAGAACAAATGGAGATTTATAGAAGAAATGGAGAGGGGAAGATGCCTCTGTCTTGGGCTCAGATTAAGGACATGCCCTTTACTCATAGGGTTGTATTAGAGAGCTTGAGGATGGCTAGCATCATATCTTTCACTTTTAGGGAGGCAGTGGTTGATGTGGAATATAAAGGGTACCTAATACCAAAGGGTTGGAAGGTCATGCCCTTGTTCAGGAATATTCATCACAACCCTGACTACTTCTCTGACCCTCAAATCTTTGATCCCTCTAGATTTGAGGTGGCTCCAAGGCCCAATACATTCATGCCATTTGGCAATGGAGTACACTCTTGCCCTGGGAATGAACTTGCCAAGCTGGAGATCCTCATCTTACTTCATCACCTCATTACCAAATTTAGGTGGGAAGTTGTGGGATCACAAAGCGGGGTTCAATATGGGCCATTCCCAGTGCCTGTCGACGGGCTACCGGCCAGATTTTTCAAACAAACAGCAACCAACCAATAG | 1182 | 47.04 | MLASAAAARFVLVTNAHLFRPTYPKSKETMIGPAALFFHQGNYHSSLRKLVQNSLSLERLRILVPPIVAAAISAADSWASAGHVINTFLAMKKFSFEVGILAVFGKLENHYSEKLKENYCILDKGYNSFPTRLPGTAYSKALSARKKLREILGEIIMERREKRVTERDFLGHLLNFRDDQNGETLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNLKLFQAVRAEQMEIYRRNGEGKMPLSWAQIKDMPFTHRVVLESLRMASIISFTFREAVVDVEYKGYLIPKGWKVMPLFRNIHHNPDYFSDPQIFDPSRFEVAPRPNTFMPFGNGVHSCPGNELAKLEILILLHHLITKFRWEVVGSQSGVQYGPFPVPVDGLPARFFKQTATNQ | 393 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 10378617 | 10383938 | - | Tan0004622.3 | Tan02g0909 | 743535 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan02g0909 | 393 | SUPERFAMILY | Cytochrome P450 | 2 | 386 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g0909 | 393 | PRINTS | P450 superfamily signature | 337 | 348 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g0909 | 393 | PRINTS | P450 superfamily signature | 328 | 337 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g0909 | 393 | PRINTS | P450 superfamily signature | 200 | 217 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g0909 | 393 | PRINTS | P450 superfamily signature | 257 | 268 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g0909 | 393 | PANTHER | CYTOCHROME P450 26 | 2 | 365 | - | GO:0004497(PANTHER)|GO:0010295(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER) | |
| Tan02g0909 | 393 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 330 | 339 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Tan02g0909 | 393 | Pfam | Cytochrome P450 | 3 | 363 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g0909 | 393 | PRINTS | E-class P450 group I signature | 189 | 206 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g0909 | 393 | PRINTS | E-class P450 group I signature | 256 | 274 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g0909 | 393 | PRINTS | E-class P450 group I signature | 337 | 360 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g0909 | 393 | PRINTS | E-class P450 group I signature | 327 | 337 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g0909 | 393 | PRINTS | E-class P450 group I signature | 296 | 320 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g0909 | 393 | Gene3D | Cytochrome P450 | 1 | 387 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan02g0909 | Tan-Chr2:10378617 | Tan02g0911 | Tan-Chr2:10379204 | 7.30E-206 | dispersed | |
| Tan02g0908 | Tan-Chr2:10378617 | Tan02g0909 | Tan-Chr2:10378617 | 1.70E-228 | tandem | |
| Tan02g0909 | Tan-Chr2:10378617 | Tan02g0910 | Tan-Chr2:10378617 | 6.30E-157 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan02g0909 | K09843 | - | csv:101219389 | 697.197 |