Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan02g0911 | ATGGAGATTCTCTCTGTTACTCTGTACTTAACAATATTACTCCTCTTTGTTTCTGTTTTTTTCTTTTCCTTCAAGAGAAATGAAAGGCAAAAATCCCAAAAATCTCTAAGGCTTCCTCCTGGTTCCATGGGATTGCCATGGATTGGAGAAACTTTGCAACTCTATTCTCAAGACCCCAACTTATTTTTCTCAGAAAAACAGAGAAGATATGGAGAAATTTTTAAGACCAATATTTTGGGATGTCCTTGTGTGATGTTGGCCAGCGCCGCCGCAGCCCGGTTCGTTCTGGTGACTAACGCCCATTTGTTCCGGCCGACTTACCCCAAAAGCAAAGAGACGATGATCGGCCCGGCAGCGCTTTTCTTCCACCAGGGAAATTACCATTCTAGCCTCCGGAAGCTTGTTCAAAACTCTCTCTCGCTTGAACGCCTCAGAATCCTTGTTCCTCCTATTGTAGCCGCCGCCATTTCCGCCGCCGACTCCTGGGCCTCCGCCGGCCACGTCATCAACACCTTCCTCGCAATGAAAAAGTTTTCTTTCGAGGTGGGAATTCTAGCAGTGTTTGGCAAACTAGAAAATCACTACAGCGAGAAGCTAAAAGAAAACTATTGCATATTAGACAAAGGCTACAACTCTTTTCCAACCCGATTACCAGGAACAGCATATTCAAAAGCATTATCAGCGAGGAAGAAGCTGAGGGAGATTCTGGGAGAGATAATAATGGAGAGGAGAGAAAAAAGAGTAACAGAGAGAGATTTTTTGGGTCATCTTTTGAACTTCAGAGATGATCAAAATGGTGAAACTTTAACTGAGGATCAGATCGCCGACAACATCATCGGAGTTCTGTTTGCGGCGCAGGACACCACCGCCAGTGTGCTGACGTGGATTCTTAAGTATCTTCATGATAATTTGAAGCTCTTTCAGGCTGTCAGGGCAGAACAAATGGAGATTTATAGAAGAAATGGAGAGGGGAAGATGCCTCTGTCTTGGGCTCAGATTAAGGACATGCCCTTTACTCATAGGGTTGTATTAGAGAGCTTGAGGATGGCTAGCATCATATCTTTCACTTTTAGGGAGGCAGTGGTTGATGTGGAATATAAAGGGTACCTAATACCAAAGGGTTGGAAGGTCATGCCCTTGTTCAGGAATATTCATCACAACCCTGACTACTTCTCTGACCCTCAAATCTTTGATCCCTCTAGATTTGAGGTGGCTCCAAGGCCCAATACATTCATGCCATTTGGCAATGGAGTACACTCTTGCCCTGGGAATGAACTTGCCAAGCTGGAGATCCTCATCTTACTTCATCACCTCATTACCAAATTTAGGTAA | 1332 | 44.52 | MEILSVTLYLTILLLFVSVFFFSFKRNERQKSQKSLRLPPGSMGLPWIGETLQLYSQDPNLFFSEKQRRYGEIFKTNILGCPCVMLASAAAARFVLVTNAHLFRPTYPKSKETMIGPAALFFHQGNYHSSLRKLVQNSLSLERLRILVPPIVAAAISAADSWASAGHVINTFLAMKKFSFEVGILAVFGKLENHYSEKLKENYCILDKGYNSFPTRLPGTAYSKALSARKKLREILGEIIMERREKRVTERDFLGHLLNFRDDQNGETLTEDQIADNIIGVLFAAQDTTASVLTWILKYLHDNLKLFQAVRAEQMEIYRRNGEGKMPLSWAQIKDMPFTHRVVLESLRMASIISFTFREAVVDVEYKGYLIPKGWKVMPLFRNIHHNPDYFSDPQIFDPSRFEVAPRPNTFMPFGNGVHSCPGNELAKLEILILLHHLITKFR | 443 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 10379204 | 10383938 | - | Tan0004622.2 | Tan02g0911 | 743537 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan02g0911 | 443 | Gene3D | Cytochrome P450 | 27 | 443 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g0911 | 443 | Pfam | Cytochrome P450 | 39 | 443 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g0911 | 443 | PRINTS | P450 superfamily signature | 284 | 301 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g0911 | 443 | PRINTS | P450 superfamily signature | 421 | 432 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g0911 | 443 | PRINTS | P450 superfamily signature | 412 | 421 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g0911 | 443 | PRINTS | P450 superfamily signature | 341 | 352 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g0911 | 443 | SUPERFAMILY | Cytochrome P450 | 32 | 443 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g0911 | 443 | PANTHER | CYTOCHROME P450 26 | 37 | 442 | - | GO:0004497(PANTHER)|GO:0010295(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER) | |
| Tan02g0911 | 443 | FunFam | Abscisic acid 8 | 28 | 443 | - | - | |
| Tan02g0911 | 443 | PRINTS | E-class P450 group I signature | 380 | 404 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g0911 | 443 | PRINTS | E-class P450 group I signature | 273 | 290 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g0911 | 443 | PRINTS | E-class P450 group I signature | 67 | 86 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g0911 | 443 | PRINTS | E-class P450 group I signature | 340 | 358 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g0911 | 443 | PRINTS | E-class P450 group I signature | 411 | 421 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g0911 | 443 | PRINTS | E-class P450 group I signature | 421 | 443 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g0911 | 443 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 414 | 423 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan02g0908 | Tan-Chr2:10378617 | Tan02g0911 | Tan-Chr2:10379204 | 5.50E-256 | dispersed | |
| Tan02g0909 | Tan-Chr2:10378617 | Tan02g0911 | Tan-Chr2:10379204 | 7.30E-206 | dispersed | |
| Tan02g0911 | Tan-Chr2:10379204 | Tan02g1829 | Tan-Chr2:84360839 | 4.60E-164 | dispersed | |
| Tan02g0910 | Tan-Chr2:10378617 | Tan02g0911 | Tan-Chr2:10379204 | 1.70E-207 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan02g0911 | K09843 | - | csv:101219389 | 752.666 |