Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan02g0912 | ATGGCCTCCACCACCAACGGACAAGAGGATCAGAACCAAGCCGGAAGGCACCAGGAAGTCGGCCACAAGAGCCTCTTGCAGAGCGATGCTCTGTATCAGTACATTCTCGAAACGAGCGTTTATCCGAGAGAGCCTGAATCGATGAAGGAATTAAGAGAATTGACTGCCAAACATCCATGGAACATCATGACGACATCAGCCGATGAAGGACAGTTCTTAAACATGCTTTTGAAGCTGATTAATGCGAAGAAGACGATGGAGATTGGAGTTTACACTGGCTATTCTCTTCTGGCTACAGCCCTAGCTCTTCCTGAAGATGGAAAGATTCTGGCTATGGATATTAACAGAGAAAATTACGAGCTCGGTTTGCCGGTGATTGAGAAGGCCGGCGTTGCTCACAAGATCGAGTTCAAGGAAGGCCCTGCTCTCCCTGTTCTTGACGAAATGGTTGCCGATGAAAAGAATCATGGAAGCTATGACTTCATTTTCGTGGATGCTGACAAAGACAACTACATCAATTATCATAAGAGGTTGATTGATCTCGTCAAAGTTGGAGGAGTGATTGGGTATGACAACACCCTATGGAACGGTTCTGTGGTGGCCCCACCTGACGCGCCAATGCGCAAGTACGTTCGATATTATAGAGACTTTGTGTTGGAACTCAACAAGGCTCTCGCGGCTGATCCTAGGATCGAGATTTGTATGCTTCCAGTTGGAGATGGAATTACTCTTTGCCGTCGGATCAAGTGA | 750 | 47.07 | MASTTNGQEDQNQAGRHQEVGHKSLLQSDALYQYILETSVYPREPESMKELRELTAKHPWNIMTTSADEGQFLNMLLKLINAKKTMEIGVYTGYSLLATALALPEDGKILAMDINRENYELGLPVIEKAGVAHKIEFKEGPALPVLDEMVADEKNHGSYDFIFVDADKDNYINYHKRLIDLVKVGGVIGYDNTLWNGSVVAPPDAPMRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGITLCRRIK | 249 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 10603751 | 10606219 | - | Tan0005137.1 | Tan02g0912 | 743538 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan02g0912 | 249 | PANTHER | O-METHYLTRANSFERASE-RELATED | 21 | 248 | IPR050362 | GO:0008757(PANTHER) | |
| Tan02g0912 | 249 | Pfam | O-methyltransferase | 37 | 248 | IPR002935 | GO:0008171(InterPro) | |
| Tan02g0912 | 249 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Tan02g0912 | 249 | ProSiteProfiles | SAM-dependent O-methyltransferase class I-type profile. | 24 | 248 | IPR002935 | GO:0008171(InterPro) | |
| Tan02g0912 | 249 | Gene3D | Vaccinia Virus protein VP39 | 23 | 249 | IPR029063 | - | |
| Tan02g0912 | 249 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 28 | 247 | IPR029063 | - | |
| Tan02g0912 | 249 | FunFam | Caffeoyl-CoA O-methyltransferase 1 | 17 | 249 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan02g0912 | Tan-Chr2:10603751 | Tan04g0054 | Tan-Chr4:483406 | 7.70E-68 | dispersed | |
| Tan01g0688 | Tan-Chr1:6548836 | Tan02g0912 | Tan-Chr2:10603751 | 2.40E-130 | transposed | |
| Tan02g0912 | Tan-Chr2:10603751 | Tan03g1550 | Tan-Chr3:71824513 | 3.20E-114 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan02g0912 | K00588 | - | csv:101205648 | 496.123 |