Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0941 ATGGATCCAAAATCTACTGATTCCTCATCACCTACTGTTAATTCCTCGGAGACTAAACCTCCAGAAGTACAGCCCCAGGCTCCTGGTACCTCTGGAATGGATAATGTGGTTCGGGATGCGCCATCTAAGCTATCTCCTACTGGCATTACTTCATGGGCTAAAAGCTTGAAAATTTCTCAACCACAGTCGGCTTCGCAAGATGGCACAACTGAAAATGCTGGGAAATCAGCGTTTGCTCGTTTTACTAGTGGCTTAGGTTTGAATTTATCTCCAAAATCTGCTGCAACTAATGATTCCCCAGATGGAACCTCTAAACCTGCCCAACCCAGTTTTGTGGGATCAATTACAAGAGGGTTGGTTGACTCTTCAAAGAGTGCTGTAAAGGCTGTACAAGTTAAAGCTCGCCACGCTGTCTCCCAAAATAAGCGAAGATACCAGGAAGGTGGATTTGATTTGGATATGACTTATATTACTGAAAATATCATTGCTATGGGCTTCCCTGCTGGTGACATGAGCTCTGGGTTTTTCGGATATGTTGAGGGTTTCTACAGGAACCATATGGAAGAAGTCATTAAGTTCTTTGAAACACATCACAAGGGAAAATACAAAGTATATAATCTTTGTTCTGAGAGGCTATATGATGCATCATTATTTGAAGGAAAGGTGGCTTGTTTTCCTTTTGATGACCATAACTGTCCCCCAGTTCAACTGATAATATCATTTTGCCAAAGTGCTTATTCATGGCTGAAGGATGATATTGAAAATGTAGTGGTTGTGCATTGCAAGGCAGGAATGGCCAGGACAGGCTTGATGATTTCCAGTCTTCTTCTATTTCTGAAGTTCTTTCCAACCGCTGAAGAATCCATTGAATACTACAACCAGAGAAGGTGTTTTGATGGCAAAGGCCTTGTTTTACCAAGTCAGATTAGGTATGTCAAATATTTTGAGCGTATTTTAACATACTTCAATGGAGAAAATCCTCCCGGTCGCAGGTGTGTGCTTAGAGGGTTTCGTCTCCACAGATGTCCATATTGGATCAGGCCTTCCATTACTGTATCTGACCATAATGGTGTTTTGTTCTCCACTAAAACGCATCAAAGAACCAAGAGTCTCTCGCCAGAAGATTTTTGGTTTACTGCACCAAAGAAAGGGATAATGGTATTCGCCTTGCCCGGGGAGCCGGGCCTAGCTGAGTTGTGTGGGGACTTCAAGGTTCATTTCCACGATCGCCAAGGAGATTTCTATTGTTGGCTAAACACAACCATGACTGAAAATCGGAAAATGCTCTACACTAATGATCTTGATGGGTTCGACAAGAGGAAACTGCCGTCCCCTGGATTTCAGGTGGAGGTTGTTCTAGTAGATACGTCGCCCGTGGACAATACTACCAAGAAGTCGGATGAAAGCTCAGGCTCGAAACCTTCTGCAGCTGATGGGAGTGGAGTTTCTGAGAACCAAAACAGAAAACCAGGAACTAACGATAAAGATGATGTATTTTCTGATAGTGAATCAGAAGGTGGTTCTTCAAGGAGCAAGAAGGAGGCAGCTACAGAATCAGGGGCAGAAGGATCAGCTGTCAAGACGACATCTAAGTCTCAAACGAGTGCGACTTCATCAGATGATGTTGCAAGTTTATCACACGCAGCAAAGCAAGTTTCGCTGGGAGATGGTGGACCTAAACAGGCTGCTCCTGCCAGCGACCGAAAAGGCGATGGAGTCAGAAGATCTGATTCCCTCTCAGAAGTTTCAAATTTAGATAGTGAATTCAAGGCAATGGCAGCTGATGCTTCTGTTTTCACATTTGGCGACGACGAAGACTACGAAAGTGAGTAA 1833 43.75 MDPKSTDSSSPTVNSSETKPPEVQPQAPGTSGMDNVVRDAPSKLSPTGITSWAKSLKISQPQSASQDGTTENAGKSAFARFTSGLGLNLSPKSAATNDSPDGTSKPAQPSFVGSITRGLVDSSKSAVKAVQVKARHAVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGFYRNHMEEVIKFFETHHKGKYKVYNLCSERLYDASLFEGKVACFPFDDHNCPPVQLIISFCQSAYSWLKDDIENVVVVHCKAGMARTGLMISSLLLFLKFFPTAEESIEYYNQRRCFDGKGLVLPSQIRYVKYFERILTYFNGENPPGRRCVLRGFRLHRCPYWIRPSITVSDHNGVLFSTKTHQRTKSLSPEDFWFTAPKKGIMVFALPGEPGLAELCGDFKVHFHDRQGDFYCWLNTTMTENRKMLYTNDLDGFDKRKLPSPGFQVEVVLVDTSPVDNTTKKSDESSGSKPSAADGSGVSENQNRKPGTNDKDDVFSDSESEGGSSRSKKEAATESGAEGSAVKTTSKSQTSATSSDDVASLSHAAKQVSLGDGGPKQAAPASDRKGDGVRRSDSLSEVSNLDSEFKAMAADASVFTFGDDEDYESE 610
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 11624401 11630153 + Tan0011734.1 Tan02g0941 743567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0941 610 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 347 453 IPR035892 -
Tan02g0941 610 ProSitePatterns Tyrosine specific protein phosphatases active site. 259 269 IPR016130 GO:0016311(InterPro)
Tan02g0941 610 MobiDBLite consensus disorder prediction 89 112 - -
Tan02g0941 610 MobiDBLite consensus disorder prediction 1 73 - -
Tan02g0941 610 Pfam Polymorphic toxin system, DSP-PTPase phosphatase 224 277 - -
Tan02g0941 610 MobiDBLite consensus disorder prediction 458 488 - -
Tan02g0941 610 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 128 325 - -
Tan02g0941 610 SMART PTEN_C2_2 327 455 IPR014020 -
Tan02g0941 610 Gene3D Protein tyrosine phosphatase superfamily 128 325 IPR029021 -
Tan02g0941 610 MobiDBLite consensus disorder prediction 522 546 - -
Tan02g0941 610 MobiDBLite consensus disorder prediction 1 31 - -
Tan02g0941 610 MobiDBLite consensus disorder prediction 44 73 - -
Tan02g0941 610 MobiDBLite consensus disorder prediction 489 517 - -
Tan02g0941 610 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 257 296 IPR000387 GO:0016311(InterPro)
Tan02g0941 610 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 156 323 IPR029021 -
Tan02g0941 610 ProSiteProfiles C2 tensin-type domain profile. 329 456 IPR014020 -
Tan02g0941 610 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 130 543 IPR051281 GO:0005829(PANTHER)|GO:0016311(PANTHER)|GO:0016314(PANTHER)
Tan02g0941 610 CDD PTP_PTEN 153 318 IPR045101 GO:0016791(InterPro)
Tan02g0941 610 Gene3D - 332 457 - -
Tan02g0941 610 MobiDBLite consensus disorder prediction 458 587 - -
Tan02g0941 610 Pfam PTEN2, C2 domain 329 456 - -
Tan02g0941 610 ProSiteProfiles Phosphatase tensin-type domain profile. 143 322 IPR029023 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0941 Tan-Chr2:11624401 Tan03g1590 Tan-Chr3:72130673 7.90E-199 dispersed
Tan02g1430 Tan-Chr2:54750054 Tan02g0941 Tan-Chr2:11624401 1.30E-35 transposed
Tan02g0941 Tan-Chr2:11624401 Tan03g1575 Tan-Chr3:72002527 1.30E-188 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0941 K01110 - csv:101222304 1096.26