Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0965 ATGGGTAGCGTTGAAGGAGAAAGAACAGCAACAGGATTTGCAGCAAGAGACCCATCTGGGTTCCTCTCTCCTTACACTTACCAACTCAGAGAAACAGGGCCAGAGGATGTTCACATAAGAGTGATATGCTGTGGGCTCTGCCATACGGACATTCACAACATCAAAAACGACCTCGGAATGTCGAATTACCCCATGGTTCCAGGGCATGAAGTTGTTGGTGAAGTGGTGGGAGTTGGGAAGAATGTGAAGAGATTTAGAGTGAAGGATTTGGTGGGAGTTGGATGCATTGTTGGATCTTGTAGAAGTTGCGAACGATGCGAAACTGATAGAGAGCAATATTGCAATAACAAAATTTGGACTAATAATGATGTTTACTCCGACGGCCGCCCAACTCAAGGCGGCTTCGCCACCGCCATGGTTGTCGACCAGAAGTTTGTGGCGAAAGTACCAGAAGGCATGGCACCGGAGCAGGCCGCGGCGGTGTTATGCGCCGGCGTGACGGTGTACAGTCCACTGAACCACTTCGGGCTGAAGAAAAGTGGGTTGAGAGGAGGGATCTTAGGCCTCGGCGGCGTTGGGCACATGGGAGTAAAACTGGCAAAGGCATTGGGCCACCATGTTACAGTCATAAGCTCCTCCAACAAGAAGAGAGAAGAAGCTCTGGACCATCTCGGCGCTGACGACTACCTTGTAAGCTCCGACGAAGCTCGGATGCAACAGGTCGTCGACTCCCTCGATTACATCATCGACACCGTTCCAGCGCATCACCCTCTCGAGCCTTACCTTTCGCTACTGAAGCTCGATGGCAAGTTGATCATGTTGGGCGTTGTTAATAACCCTCTAAAGTTCGTCTCTCCCATGGTCATCCTTGGTGAGTTTCTCGCAATGTTGACTCGCTGCTAA 903 50.83 MGSVEGERTATGFAARDPSGFLSPYTYQLRETGPEDVHIRVICCGLCHTDIHNIKNDLGMSNYPMVPGHEVVGEVVGVGKNVKRFRVKDLVGVGCIVGSCRSCERCETDREQYCNNKIWTNNDVYSDGRPTQGGFATAMVVDQKFVAKVPEGMAPEQAAAVLCAGVTVYSPLNHFGLKKSGLRGGILGLGGVGHMGVKLAKALGHHVTVISSSNKKREEALDHLGADDYLVSSDEARMQQVVDSLDYIIDTVPAHHPLEPYLSLLKLDGKLIMLGVVNNPLKFVSPMVILGEFLAMLTRC 300
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 12144033 12147193 - Tan0011312.2 Tan02g0965 743591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0965 300 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270(InterPro)|GO:0016491(InterPro)
Tan02g0965 300 FunFam Cinnamyl alcohol dehydrogenase 164 296 - -
Tan02g0965 300 Gene3D - 14 163 - -
Tan02g0965 300 Gene3D - 164 290 - -
Tan02g0965 300 CDD CAD1 11 291 IPR047109 GO:0016616(InterPro)
Tan02g0965 300 PANTHER ALDEHYDE REDUCTASE 9 289 IPR047109 GO:0009809(PANTHER)|GO:0016616(PANTHER)|GO:0016616(InterPro)|GO:0045551(PANTHER)
Tan02g0965 300 Pfam Alcohol dehydrogenase GroES-like domain 33 151 IPR013154 -
Tan02g0965 300 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 291 IPR036291 -
Tan02g0965 300 Pfam Zinc-binding dehydrogenase 191 292 IPR013149 -
Tan02g0965 300 SMART PKS_ER_names_mod 20 289 IPR020843 GO:0016491(InterPro)
Tan02g0965 300 SUPERFAMILY GroES-like 16 181 IPR011032 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0671 Tan-Chr1:6387611 Tan02g0965 Tan-Chr2:12144033 2.60E-137 dispersed
Tan02g0965 Tan-Chr2:12144033 Tan07g0907 Tan-Chr7:17673509 3.50E-83 dispersed
Tan02g0964 Tan-Chr2:12144033 Tan02g0965 Tan-Chr2:12144033 1.10E-168 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0965 K00083 - csv:101214622 483.026