Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g0995 ATGTCTAAATTTTCGCGACGATCGCCAACCGCGAGGCAGCCGCTACCGCTAGATAGGGAGGAAGCGGCAACGAATGGATTTGAAATTCATGAAAATGGCGGCATTTCTCCCTCCTCTTCCTCTTTATTTCATCAACTCCATTTCTCCTCCAATGGATTCTCAGATTCTCCTCCCCTTCCTCCGTTTGCCTTCTCCGGCAAACCTTGCAACTTCCTCATCTTCTCTCCGCCACTTGGAATCGGATTCTTTCCGTCTCCCATGGACGCGCCGGAGTATCACAAGCCCTCCGTCAGAAATTCTAAGAAGCGAGACTTAGAGGACCACTCTCTGCAACTGGCCACTGCCAACAAGAGAGCTGTGCTTGGCGAGATCACCAACTCGTTGATCTTCAGTTCCAGCCAGTGCTCGCTTTCTGATCAGGAGATGACGGATAAGGATCTGGACGACGAGGAACTCCCCGAAGGAAGGTCTGTTGATTGTTCGAAGAACTCTGGTTCTGCATCTAGTATCTATAACCACCTTCGATCTCTAGAGATGGAATTGCACATGAAGGTGCTGCCCAATAACATTGTAAAGGCTCACAATGTTGGTTCCAGTTTAAGTTTCACTCGTATGCGAGAAATTCTTGTGGATTGGTTAATAGAGGTTGCTGAGGAATACAAGCTTGTATCGGACACCCTATATCTCACCATATCACATATTGACAGATACTTATCCTCTCAAGCTGTTGACAGAAGCAAGCTACAGCTTCTTGGTGTTGGTTGCATGCTTATTGCATCAAAGTATGAAGAGATCAGTCCTCCGCATGTTGAAGACTTCTGCTATATAACAGATAATACCTATACCAAAGAACAGGTATTGAGTATGGAGAGGGAGGTACGCAAATTCTTGACCTGTGAAGGTGCCCCCACGATAAAAAATTTTCTCAGAATATTTACAAAAGTTTCTTTGGAAAATTGGAAGGCTCCAGACTTGCAATTTGAGTTCTTGAGTTGTTATCTTGCGGAGCTAAGTTTGTTAGATCACCATTGTGTACAGTTCTTACCGTCAATAGTCGCTGCATCAGCCATATTTCTTTCTAGATTCACAATTCAACCAGAGAAACACCCTTGGTGTTTACCACTACAACGTTACTCCGGTTACAGTCCATCTGAACTGAAGGAATGCATTCTTGCCATTCATGACTTGCAATTAAACAGAAAAGGATGCTGTTTACAAGCAACAAGAGACAAGTACAAGCAGCATAAGTTCAATTGTGTGGCCGAGTTATCTTCTCCTTCAGCAATTCCTGCATATTATTTTGAGGACATTGACAAGCAATCATTCAACAGGTTCTCGTTCTTAAGAACCTAA 1353 43.98 MSKFSRRSPTARQPLPLDREEAATNGFEIHENGGISPSSSSLFHQLHFSSNGFSDSPPLPPFAFSGKPCNFLIFSPPLGIGFFPSPMDAPEYHKPSVRNSKKRDLEDHSLQLATANKRAVLGEITNSLIFSSSQCSLSDQEMTDKDLDDEELPEGRSVDCSKNSGSASSIYNHLRSLEMELHMKVLPNNIVKAHNVGSSLSFTRMREILVDWLIEVAEEYKLVSDTLYLTISHIDRYLSSQAVDRSKLQLLGVGCMLIASKYEEISPPHVEDFCYITDNTYTKEQVLSMEREVRKFLTCEGAPTIKNFLRIFTKVSLENWKAPDLQFEFLSCYLAELSLLDHHCVQFLPSIVAASAIFLSRFTIQPEKHPWCLPLQRYSGYSPSELKECILAIHDLQLNRKGCCLQATRDKYKQHKFNCVAELSSPSAIPAYYFEDIDKQSFNRFSFLRT 450
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 13927453 13931137 - Tan0002640.1 Tan02g0995 743621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g0995 450 FunFam Cyclin A1 288 422 - -
Tan02g0995 450 Gene3D - 183 301 - -
Tan02g0995 450 SUPERFAMILY Cyclin-like 303 427 IPR036915 -
Tan02g0995 450 CDD CYCLIN_AtCycA-like_rpt2 303 417 - -
Tan02g0995 450 SMART cyclin_7 307 395 IPR013763 -
Tan02g0995 450 SMART cyclin_7 211 295 IPR013763 -
Tan02g0995 450 MobiDBLite consensus disorder prediction 140 161 - -
Tan02g0995 450 SUPERFAMILY Cyclin-like 169 298 IPR036915 -
Tan02g0995 450 SMART Cyclin_C_2 303 426 IPR004367 -
Tan02g0995 450 Gene3D - 170 422 - -
Tan02g0995 450 Pfam Cyclin, N-terminal domain 171 297 IPR006671 -
Tan02g0995 450 Pfam Cyclin, C-terminal domain 303 425 IPR004367 -
Tan02g0995 450 PANTHER CYCLINS 145 414 IPR039361 GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0995 Tan-Chr2:13927453 Tan02g1771 Tan-Chr2:82199619 1.00E-81 dispersed
Tan02g0995 Tan-Chr2:13927453 Tan01g4722 Tan-Chr1:113082550 1.00E-86 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g0995 K06627 - csv:101213896 615.15