Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g1010 ATGATGCTGAGGTCCTGCTACCGGCCGCTCGAGCGGTGTTTTGGCCGGTGGGCCGGCGATGGCCTTCTCTGGCACTCGGAATTGAAGCCTCATGCCTCTGGGGATTATTCGATCGCTGTTGTGCAGGCTAATTCGTGTCTTGAGGATCAGAGTCAGGTTTTCACCTCCCCTTCTGCAACTTATGTTGGTGTTTATGATGGCCATGGCGGTCCTGAGGCTTCTCGCTTCGTGAATAAGCATCTTTTTCCTTATATGCACAAGTTTGCTTCAGAACAAGGTGGGCTCTCGGAGGATGTTATTAAGAAGGCATTCAATGCTACAGAAGAGGAGTTTTTGCGTTTGGTGAAGCGGGCTTTGCCTGCAAAGCCACAGATTGCATCAGTTGGATCATGCTGTCTTGTAGGTGCAATTTCGAATAAAAAGTTATACGTTGCGAATCTAGGGGATTCGAGAGCTGTGCTCGGCCGTAGAGTTTCAGAGAGTAAGAGAACACCAATTGTTGCGGAACGACTGTCCACTGATCACAATGTCGGGGTAGATGAAGTTAGGAAAGAGGTTGTAGCACTTCATCCTGATGACTCCCATATTGTTGTCTATACCCGTGGAGTTTGGAGGATAAAGGGCATAATTCAGGTTTCAAGATCTATTGGCGATGTCTATTTAAAAAAACCCGAATTCAACCGAGATCCAATATTCCAACAATTTGGGAACCCCGTTCCGTTGAAGCGACCAGTAATGACTGCAGAACCATCGATCCTGACACGAGAGCTTAAACCCCAAGACTTATTCCTGATCTTTGCATCAGATGGCCTCTGGGAACAACTGACCGATGAGGCTGCTGTGGAGATAGTTTTCAAGAACCCAAGAGCTGGAATTGCAAAGAGATTAGTGAGTGCTGCCCTCCACGAGGCAGCGAGGAAACGGGAAATGAGATACGCCGACATAAAGAAGATCGAAAAGGGGATTCGACGTCATTTCCACGACGACATCACTGTCATCGTCGTTTATCTCGACCACAACAGAAGCTCATCTTCCAGCCGAGCAAAGAACAGCATTCCCGGGTACACCAATGCACCTGTTGACATTTTCTCTCTTAAGTCAAACTATGAGACAGAGGAAAAACTTCACACAATGTTCTGA 1140 47.37 MMLRSCYRPLERCFGRWAGDGLLWHSELKPHASGDYSIAVVQANSCLEDQSQVFTSPSATYVGVYDGHGGPEASRFVNKHLFPYMHKFASEQGGLSEDVIKKAFNATEEEFLRLVKRALPAKPQIASVGSCCLVGAISNKKLYVANLGDSRAVLGRRVSESKRTPIVAERLSTDHNVGVDEVRKEVVALHPDDSHIVVYTRGVWRIKGIIQVSRSIGDVYLKKPEFNRDPIFQQFGNPVPLKRPVMTAEPSILTRELKPQDLFLIFASDGLWEQLTDEAAVEIVFKNPRAGIAKRLVSAALHEAARKREMRYADIKKIEKGIRRHFHDDITVIVVYLDHNRSSSSSRAKNSIPGYTNAPVDIFSLKSNYETEEKLHTMF 379
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 14277094 14280249 - Tan0021436.1 Tan02g1010 743636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g1010 379 PANTHER PROTEIN PHOSPHATASE 30 336 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Tan02g1010 379 SUPERFAMILY PP2C-like 42 338 IPR036457 -
Tan02g1010 379 ProSitePatterns PPM-type phosphatase domain signature. 61 69 IPR000222 GO:0043169(InterPro)
Tan02g1010 379 Pfam Protein phosphatase 2C 56 306 IPR001932 -
Tan02g1010 379 FunFam Probable protein phosphatase 2C 42 26 345 - -
Tan02g1010 379 SMART PP2C_4 25 335 IPR001932 -
Tan02g1010 379 CDD PP2Cc 42 337 IPR001932 -
Tan02g1010 379 Gene3D - 25 348 IPR036457 -
Tan02g1010 379 ProSiteProfiles PPM-type phosphatase domain profile. 35 337 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g1010 Tan-Chr2:14277094 Tan08g1501 Tan-Chr8:62350594 1.20E-115 dispersed
Tan02g1010 Tan-Chr2:14277094 Tan05g1111 Tan-Chr5:9942096 1.70E-111 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g1010 - - - 0.0