Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g1022 ATGGAGCAAATCACAGGCCCCATTATTGAAGATGAAGATCATCAATGGAGCTGCTCTCTCAATAATGGAACCTTGACAGCTGATGAAGAAGCAACTTTCATGACTCAACTCTTCAATTCAACAAACCCTGATCCTTTCATGGCTGCCCTTCATCATAATCTTCATGAAGAAGTTCCCTATGAAAGACCTTCTTCTTCTTCAAGCTGCTTTTACAGGCTTTCACAAGAGACTAGTGAATTCAGTGGTGGAAGTTATTGCAGCCAATTATTATTCCCCACTTATCAAAATGATGATCATAAATATTATTGCAATAATCCCATCAATTTTTGCTTGGGAGATCAGCTTGGAAATGATAACAATGGTGGTGCTTTCAACCTTGAAGATGAGGACTCTATCAATTTGCAGGCTTGTTCTGATGCTGAATTCATCAAATTACCTGAAGTTCAAGAAACTGCCATGGCAGAAGAAGAGGGTCATAACCAGCTTCAGATCAATTGCAAGAAAAGATCTGTACAGAAGATCAAGAGGAATGAGAGGTCAAGGAAAACTCAGAAGCTTACCTCAAGCAGCTACACTGAAGAAGATGGCAATGCTGGCCATAGCAGGCAAAGCACAAGCAGCTATTGCTCGGAAGACGAATCGAACGCCTCTCTCGAGCTAAACGCAGGCGCTAATAACTCGGGATCGAATCTGAAAGGGCCGACGAAATCCCGAGCCAGCAGAGGCTCAGCTACAGATCCACAGAGCCTCTATGCAAGGAGAAGAAGAGAAAGAATCAATGAGAGGTTGAAAATATTACAAAACCTTGTCCCAAATGGAACAAAGGTTGATATCAGCACAATGCTTGAGGAAGCTGTTCAATATGTGAAGTTTCTACAACTCCAAATCAAGCTATTAAGCTCTGATGATTTATGGATGTATGCTCCGATCGCTTACAACGGAATGGATATCGGGCTTAATCCGACCCCGACCCCGAACACGCCAGAAAAATCATGA 996 42.47 MEQITGPIIEDEDHQWSCSLNNGTLTADEEATFMTQLFNSTNPDPFMAALHHNLHEEVPYERPSSSSSCFYRLSQETSEFSGGSYCSQLLFPTYQNDDHKYYCNNPINFCLGDQLGNDNNGGAFNLEDEDSINLQACSDAEFIKLPEVQETAMAEEEGHNQLQINCKKRSVQKIKRNERSRKTQKLTSSSYTEEDGNAGHSRQSTSSYCSEDESNASLELNAGANNSGSNLKGPTKSRASRGSATDPQSLYARRRRERINERLKILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNPTPTPNTPEKS 331
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 14677850 14680549 + Tan0015829.1 Tan02g1022 743648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g1022 331 MobiDBLite consensus disorder prediction 156 255 - -
Tan02g1022 331 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 64 312 IPR045843 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006357(PANTHER)
Tan02g1022 331 CDD bHLH_AtIND_like 244 306 - -
Tan02g1022 331 FunFam Basic helix-loop-helix transcription factor 244 301 - -
Tan02g1022 331 Gene3D - 242 300 IPR036638 GO:0046983(InterPro)
Tan02g1022 331 MobiDBLite consensus disorder prediction 184 247 - -
Tan02g1022 331 Pfam Helix-loop-helix DNA-binding domain 253 293 IPR011598 GO:0046983(InterPro)
Tan02g1022 331 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 243 292 IPR011598 GO:0046983(InterPro)
Tan02g1022 331 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 243 309 IPR036638 GO:0046983(InterPro)
Tan02g1022 331 SMART finulus 249 298 IPR011598 GO:0046983(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g4705 Tan-Chr1:112934162 Tan02g1022 Tan-Chr2:14677850 1.90E-37 dispersed
Tan02g1022 Tan-Chr2:14677850 Tan02g1741 Tan-Chr2:81174060 7.90E-36 dispersed
Tan11g1396 Tan-Chr11:12413439 Tan02g1022 Tan-Chr2:14677850 9.90E-19 transposed
Tan01g0640 Tan-Chr1:6143738 Tan02g1022 Tan-Chr2:14677850 2.90E-47 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
26734 PF00010 HLH 2.70E-09 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g1022 - - - 0.0