Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan02g1037 | ATGAGAGGACAACATTCTCACCCACTGAAGCCGGGTTTCGCCGGACCCGATGAGGAAAACGAACCGGTTCGCACCTATATACCCGGAATGAACGCCCCGTTAGGCGCCGGAATTCGGAAGAAGGGGACCGGAGTCCGGCCATGGCTGCTCCTGGACTCGACCGGCGGAGCTCAGGTGGTTGAGGCCGGAAAACATGCGATCATGCGGCGGACCGGCCTGCCGGCGCGGGACCTCCGGATCCTCGATCCGATGCTCTCGTATCCGTCTACGATTCTTGGCCGTGAGAAAGCTATTGTGATCAATTTGGAGCACATCAAAGCCATTATCACCGCTCAAGATGTATTCGTGTTGAATGCTAGGGATCCGTCCGTAACCCCCTTTGTAGAGGAGCTTCAGAGGCGGGTGCTGCGACACCACCAAGCGACTAAGGCCGCCCAGGAGGGCAATGGTGATGATTCTAGTTGGAGAAATCTGTATGACATGGAGGAGTCACGATCGAGGGCTCAAAGTCCTCATAATTCCTACCAAGGATTTCCACAGGCTGAAGAGGAGGAGGGGAAGGAAAATGGGAAACAAGGTCTTGAAAATCGGGAGGGATTGAAGGTTCTTCCATTTGAGTTTGTTGCTTTGGAGGCATGCCTTGAAGCTGCCTGCAGTTGCTTAGAAAGTGAAGCAGATACATTGGAGCTAGAAGCTCACCCAGCTTTGGATAAGCTGACTTCTAAGATTAGTACTCTCAACTTGGAACGGGTGCGTCAAATCAAAAGTCGATTGGTTGCAATAACTGGACGGGTTCAAAAGGTGCGAGATGAATTGGAGCACTTGCTAGATGATGATGAGGATATGGCGGAGATGTACTTAACAGAGAAGATGGTCCAGCAACAGCTTGAGACCTCTTCCACTTCTTCAATTCCTGAAAGAGATGAAATGGATGATGAAGCTCAGCAATTAGGCAAAGATGACAGTATTCCTGCTGAAATATCATTGGAAGGTGGTGGAATTTCTGGTAATTATGAAGGCAATATGGATGCTTCCCAGGATCATTTGTTTGGTGCATCACATGTGGGCAGGGAGAGCCACGGGACCCGGACAAGTACTACACATAGTGCTATAAGCAAACACCTCGATGTGGAGGAACTCGAGATGCTGTTGGAGGCATACTTTGTGCAAATTGATGGTACACTGAACAAACTTTCCACGCTGAGGGAGTATGTAGATGACACAGAAGATTACATCAACATAATGTTGGATGACAAACAGAACCATCTTCTACAAATGGGAGTAATGTTGACAACAGCAACCCTCGTCGTGAGCGCCTTCGTCGTGGTGGCAGGTATCTTTGGAATGAACATCCATATTGAACTGTTCGAACCGGAAAAAGCAGGCATGCCGGAGTTCCTGTGGACTGTTGGTGGTGGTGCTACGGGAACCATCTTCTTGTATGTCATTGCCATTGCCTGGTGCAAGCACAAACGCCTGCTCGAGTAG | 1488 | 49.66 | MRGQHSHPLKPGFAGPDEENEPVRTYIPGMNAPLGAGIRKKGTGVRPWLLLDSTGGAQVVEAGKHAIMRRTGLPARDLRILDPMLSYPSTILGREKAIVINLEHIKAIITAQDVFVLNARDPSVTPFVEELQRRVLRHHQATKAAQEGNGDDSSWRNLYDMEESRSRAQSPHNSYQGFPQAEEEEGKENGKQGLENREGLKVLPFEFVALEACLEAACSCLESEADTLELEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDEDMAEMYLTEKMVQQQLETSSTSSIPERDEMDDEAQQLGKDDSIPAEISLEGGGISGNYEGNMDASQDHLFGASHVGRESHGTRTSTTHSAISKHLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVVAGIFGMNIHIELFEPEKAGMPEFLWTVGGGATGTIFLYVIAIAWCKHKRLLE | 495 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 15647461 | 15651678 | - | Tan0017024.1 | Tan02g1037 | 743663 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan02g1037 | 495 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Tan02g1037 | 495 | Gene3D | Magnesium transport protein CorA, transmembrane region | 158 | 423 | - | - | |
Tan02g1037 | 495 | Coils | Coil | 211 | 231 | - | - | |
Tan02g1037 | 495 | Gene3D | - | 37 | 119 | - | - | |
Tan02g1037 | 495 | PANTHER | RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL | 36 | 493 | IPR039204 | GO:0015095(PANTHER)|GO:0015693(PANTHER) | |
Tan02g1037 | 495 | CDD | Mrs2_Mfm1p-like | 48 | 493 | IPR039204 | - | |
Tan02g1037 | 495 | Pfam | Magnesium transporter MRS2-like | 373 | 418 | - | - | |
Tan02g1037 | 495 | Pfam | Magnesium transporter MRS2-like | 53 | 137 | - | - | |
Tan02g1037 | 495 | Pfam | Magnesium transporter MRS2-like | 201 | 294 | - | - | |
Tan02g1037 | 495 | MobiDBLite | consensus disorder prediction | 304 | 319 | - | - | |
Tan02g1037 | 495 | MobiDBLite | consensus disorder prediction | 162 | 191 | - | - | |
Tan02g1037 | 495 | MobiDBLite | consensus disorder prediction | 294 | 320 | - | - | |
Tan02g1037 | 495 | FunFam | Magnesium transporter MRS2-1 | 36 | 119 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan02g1037 | Tan-Chr2:15647461 | Tan04g2493 | Tan-Chr4:83806570 | 1.10E-89 | dispersed | |
Tan02g1037 | Tan-Chr2:15647461 | Tan06g2463 | Tan-Chr6:77240801 | 1.30E-77 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan02g1037 | - | - | - | 0.0 |