Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g1037 ATGAGAGGACAACATTCTCACCCACTGAAGCCGGGTTTCGCCGGACCCGATGAGGAAAACGAACCGGTTCGCACCTATATACCCGGAATGAACGCCCCGTTAGGCGCCGGAATTCGGAAGAAGGGGACCGGAGTCCGGCCATGGCTGCTCCTGGACTCGACCGGCGGAGCTCAGGTGGTTGAGGCCGGAAAACATGCGATCATGCGGCGGACCGGCCTGCCGGCGCGGGACCTCCGGATCCTCGATCCGATGCTCTCGTATCCGTCTACGATTCTTGGCCGTGAGAAAGCTATTGTGATCAATTTGGAGCACATCAAAGCCATTATCACCGCTCAAGATGTATTCGTGTTGAATGCTAGGGATCCGTCCGTAACCCCCTTTGTAGAGGAGCTTCAGAGGCGGGTGCTGCGACACCACCAAGCGACTAAGGCCGCCCAGGAGGGCAATGGTGATGATTCTAGTTGGAGAAATCTGTATGACATGGAGGAGTCACGATCGAGGGCTCAAAGTCCTCATAATTCCTACCAAGGATTTCCACAGGCTGAAGAGGAGGAGGGGAAGGAAAATGGGAAACAAGGTCTTGAAAATCGGGAGGGATTGAAGGTTCTTCCATTTGAGTTTGTTGCTTTGGAGGCATGCCTTGAAGCTGCCTGCAGTTGCTTAGAAAGTGAAGCAGATACATTGGAGCTAGAAGCTCACCCAGCTTTGGATAAGCTGACTTCTAAGATTAGTACTCTCAACTTGGAACGGGTGCGTCAAATCAAAAGTCGATTGGTTGCAATAACTGGACGGGTTCAAAAGGTGCGAGATGAATTGGAGCACTTGCTAGATGATGATGAGGATATGGCGGAGATGTACTTAACAGAGAAGATGGTCCAGCAACAGCTTGAGACCTCTTCCACTTCTTCAATTCCTGAAAGAGATGAAATGGATGATGAAGCTCAGCAATTAGGCAAAGATGACAGTATTCCTGCTGAAATATCATTGGAAGGTGGTGGAATTTCTGGTAATTATGAAGGCAATATGGATGCTTCCCAGGATCATTTGTTTGGTGCATCACATGTGGGCAGGGAGAGCCACGGGACCCGGACAAGTACTACACATAGTGCTATAAGCAAACACCTCGATGTGGAGGAACTCGAGATGCTGTTGGAGGCATACTTTGTGCAAATTGATGGTACACTGAACAAACTTTCCACGCTGAGGGAGTATGTAGATGACACAGAAGATTACATCAACATAATGTTGGATGACAAACAGAACCATCTTCTACAAATGGGAGTAATGTTGACAACAGCAACCCTCGTCGTGAGCGCCTTCGTCGTGGTGGCAGGTATCTTTGGAATGAACATCCATATTGAACTGTTCGAACCGGAAAAAGCAGGCATGCCGGAGTTCCTGTGGACTGTTGGTGGTGGTGCTACGGGAACCATCTTCTTGTATGTCATTGCCATTGCCTGGTGCAAGCACAAACGCCTGCTCGAGTAG 1488 49.66 MRGQHSHPLKPGFAGPDEENEPVRTYIPGMNAPLGAGIRKKGTGVRPWLLLDSTGGAQVVEAGKHAIMRRTGLPARDLRILDPMLSYPSTILGREKAIVINLEHIKAIITAQDVFVLNARDPSVTPFVEELQRRVLRHHQATKAAQEGNGDDSSWRNLYDMEESRSRAQSPHNSYQGFPQAEEEEGKENGKQGLENREGLKVLPFEFVALEACLEAACSCLESEADTLELEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDEDMAEMYLTEKMVQQQLETSSTSSIPERDEMDDEAQQLGKDDSIPAEISLEGGGISGNYEGNMDASQDHLFGASHVGRESHGTRTSTTHSAISKHLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVVAGIFGMNIHIELFEPEKAGMPEFLWTVGGGATGTIFLYVIAIAWCKHKRLLE 495
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 15647461 15651678 - Tan0017024.1 Tan02g1037 743663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g1037 495 MobiDBLite consensus disorder prediction 1 21 - -
Tan02g1037 495 Gene3D Magnesium transport protein CorA, transmembrane region 158 423 - -
Tan02g1037 495 Coils Coil 211 231 - -
Tan02g1037 495 Gene3D - 37 119 - -
Tan02g1037 495 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 36 493 IPR039204 GO:0015095(PANTHER)|GO:0015693(PANTHER)
Tan02g1037 495 CDD Mrs2_Mfm1p-like 48 493 IPR039204 -
Tan02g1037 495 Pfam Magnesium transporter MRS2-like 373 418 - -
Tan02g1037 495 Pfam Magnesium transporter MRS2-like 53 137 - -
Tan02g1037 495 Pfam Magnesium transporter MRS2-like 201 294 - -
Tan02g1037 495 MobiDBLite consensus disorder prediction 304 319 - -
Tan02g1037 495 MobiDBLite consensus disorder prediction 162 191 - -
Tan02g1037 495 MobiDBLite consensus disorder prediction 294 320 - -
Tan02g1037 495 FunFam Magnesium transporter MRS2-1 36 119 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g1037 Tan-Chr2:15647461 Tan04g2493 Tan-Chr4:83806570 1.10E-89 dispersed
Tan02g1037 Tan-Chr2:15647461 Tan06g2463 Tan-Chr6:77240801 1.30E-77 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g1037 - - - 0.0